Eutypa lata: UCREL1_7088
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Entry
UCREL1_7088 CDS
T03103
Name
(GenBank) putative dna mismatch repair protein msh6 protein
KO
K08737
DNA mismatch repair protein MSH6
Organism
ela
Eutypa lata
Pathway
ela03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ela00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
UCREL1_7088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ela03400
]
UCREL1_7088
DNA repair and recombination proteins [BR:
ela03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
UCREL1_7088
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
AAA_23
SPT6_acidic
AAA_21
hAT-like_RNase-H
AAA_29
Bcl-2
Motif
Other DBs
NCBI-ProteinID:
EMR65943
UniProt:
M7SNC6
LinkDB
All DBs
Position
Unknown
AA seq
1093 aa
AA seq
DB search
MGSSPSRKVKKAVNYAESSDDDEDVFVAMKAAKSRRRNRPQSRVVYDDDDGDVYEESKES
EVVDENDEMADFVVSDDSDGPSKKRKRPSKPQSSRKRSQTLSPAARQAMNDMADEDDDMD
AIMEDMPSTSTAQKWRYDPDTIDPVKIRTPTASSKTSTSKPKAHTRDPEERYPWLAKIFD
INRNPLGHPDYDPSTVYVPPMAMQKFSAFERQYWEIKQKLWDTVVFFKKGKFYELYENDA
TIGHQLFDLKLTDRVNMRMVGVPESSLDMWVNQFIAKGYKVARVDQMETALGKEMRERDA
TKAKKQDKIIRRELACILTGGTLVDGSMLQDDMATYCVAIKESVIDDHPVFGISFVDAAT
GQFFLSEFEDDVDLTKFETFVAQTNPRELILEKSSISTKALRILKNSTSPTTIWNYFKSG
SEFWDAELTRRELGCNGYFASEDNAEDEVWPETLDKAKDKPFLMSALGALVQYLRVLKIE
RILLSQGNFSWYSPIHKNGTLILDGQTLINLEVFSNTVNGGSDGTLFSLLNRCVTPFGKR
LFRQWVCHPLCNIQKINERLDAVDLLNADRTVREQFASQLTKMPDLERLISRVHAGACRP
EDFVKVLEGFEQIEYTMTLLSAFGGGSGLVDRLVSSMPDLHEPLSFWKSAFDRRKAREEK
TLIPERGIEEDFDSSHDQIIGIKDDLQKLLDAKKSELKNKSLKFTDIGKEVYQIEAPKSV
KVPKDWQQMSATASVKRYYFKELTELVRQLQEAEETHSQLVKEVASRLFKRFDVDYDTWQ
RAIRVVAQLDCLVSLSRSSSSLGEPSCRPVFVDEERSVVEFEELRHPCMLNTVDDFIPND
VVLGGESPKINLLTGANAAGKSTILRMSCIAVIMAQIGCYVPAVSARLTPCDRIMSRLGA
NDNIFAAQSTFFVELSETKKILSEATPRSLVILDELGRGTSSYDGVAVAQAVLHHVATHV
GCVGFFATHYHSLATEFENHPEISPKRMRIHVDEAEKRITFLYRLEAGVAEGSFGMHCAA
MCGINGRVIERAEVAAREWEHTSRLKESLERAKEGCYIPLGLLSDVAALLDEEKSADVGP
RGLEVLVRAIEAL
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgggtagcagtccatcgcgtaaggtcaagaaggcagtcaattacgccgaatcatcagac
gacgacgaagatgtctttgtagcaatgaaagctgccaaatcccgacgtcgaaaccggcca
caatctagagtagtttacgacgatgatgatggtgacgtatacgaggaaagcaaggaatcc
gaggtcgtagacgaaaatgacgagatggcggatttcgttgtttctgacgactcggatggc
ccctccaaaaagaggaagcgcccttccaagccacaatcatcacgcaagaggtcacaaacc
ctttcaccggctgccagacaggcgatgaacgacatggcagacgaggatgacgacatggac
gccatcatggaagatatgccctctacttctaccgcccaaaagtggcgatacgaccctgac
accatcgatcccgtcaagatacgtacacctaccgcatcatcaaaaacatctacaagcaaa
cccaaagcccacacccgtgatcccgaggaacgatacccatggcttgccaagatttttgac
attaaccggaaccctcttggacatcccgactatgacccgtccaccgtctacgtgccaccg
atggctatgcagaaattctcagccttcgagaggcagtactgggagatcaaacagaagctg
tgggatacggttgtgttcttcaagaaggggaagttctacgaactctacgaaaatgatgcc
accatcggtcaccagctcttcgatctaaagcttacagatcgcgtcaacatgcgtatggtt
ggcgttcccgagagctctctcgacatgtgggtcaaccagttcatcgccaaggggtacaag
gtggctcgtgtcgatcagatggagacagcgttgggcaaggagatgcgtgaaagggatgcc
accaaggcgaagaaacaggacaagatcattcgccgagagctcgcttgtattctgactggt
ggcactctggtcgacggtagcatgctccaggatgatatggccacgtattgtgtcgccatc
aaggaatccgtcatcgatgaccatcctgtattcggcatctcgtttgtcgatgctgctaca
ggacagttcttcctgtctgagtttgaggatgatgtcgacctgacaaaattcgagaccttt
gttgcccaaaccaaccctcgtgagctcatcctagagaaatctagcatctcgacaaaagca
ctgcgcatactcaaaaatagcacgtcacctacgaccatctggaactacttcaaatcggga
agcgagttctgggatgcagaactcacccggcgggaacttggctgcaatggctactttgct
tctgaggataacgcggaagacgaagtctggcctgaaactctagacaaggcaaaggacaaa
cccttcttgatgtccgccctcggagccctggtccagtacctccgggtgcttaaaatcgag
aggattctcctttctcaaggcaacttctcctggtatagcccgatccacaaaaacggcact
ctaatattggacgggcaaaccctcatcaaccttgaggtcttctccaatacggtcaatgga
ggttctgatgggaccttgttctccctcttaaacagatgtgtgacgccgttcggcaagcgg
ctgttccgccagtgggtctgccacccgctttgcaacattcaaaaaatcaacgaaaggtta
gacgcggttgacctgcttaacgctgatagaactgtgcgagagcaattcgcttcgcagttg
accaagatgccggacctcgaacgcctgatctctagagttcatgcgggagcctgtcgacca
gaggattttgtcaaagttctggaaggctttgagcagattgaatacactatgacactcctt
agcgcatttggtggtggaagtggcctggtcgatcgtcttgtctcgtccatgcctgatctc
cacgagccactgtcgttctggaaatctgcctttgatcgcaggaaggccagggaagagaag
acactgatccctgagcgaggtattgaggaggatttcgacagcagtcacgaccagattatt
ggaatcaaggatgacttgcagaagctgctagacgcgaagaagagcgagctcaagaataag
tcgttgaagttcaccgacatcggcaaggaagtctaccagatcgaggcgcctaaatcggtc
aaggttcccaaggactggcagcagatgtctgcgactgcgagcgtcaagcgttactacttc
aaagaattgactgaactcgtccgacagctgcaggaggccgaagagacccattcccagctc
gtcaaagaagtagcttcccggctcttcaagcggtttgatgtcgactatgatacatggcag
cgggctatccgcgtcgtggcgcagttagactgcctagtcagcctctcaaggtcatcgtcg
tcacttggtgaaccgagctgtcgacctgtgtttgtggacgaggagcgcagtgttgtcgag
tttgaggagctccgtcatccatgtatgctcaataccgttgacgacttcatccccaacgat
gtcgtgcttggtggcgagtcacccaaaattaacctgctcacgggggcaaacgccgccggt
aaatccacgatcctacgcatgtcttgtattgccgtcattatggcccagatcggttgttac
gtgcctgctgtgtcggctcgccttacgccctgtgaccgtatcatgtcgcgtcttggtgcc
aacgacaacatattcgcggcgcagagtacgttcttcgtcgaattatccgagaccaagaag
attctgtccgaggcgacgccccgctcgctcgtcatcctcgacgagctcggccgcggtacc
tcgagctacgacggcgtcgccgtcgcccaggcggtgctgcaccacgtggcgacgcacgtc
ggctgcgtcggcttcttcgcgacgcactaccactcgctcgccacggagttcgagaaccac
ccggagattagccccaagcggatgcgtatccacgtcgacgaggccgagaagcgcatcacg
ttcctctaccggctcgaggcgggcgtcgccgagggcagcttcggcatgcactgcgcggcc
atgtgcgggatcaacggccgcgtcatcgagcgcgccgaagtggcggccagggagtgggag
cacacgagccggctgaaggagagcctcgagcgcgccaaggagggctgctatatccccctc
ggcttgctgagcgatgtcgcggccctgctcgacgaggagaagagcgcggatgtggggcct
agggggctggaggtcctggttagggctattgaggcgctttga
DBGET
integrated database retrieval system
