Eutypa lata: UCREL1_7341
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Entry
UCREL1_7341 CDS
T03103
Name
(GenBank) putative atp-dependent helicase nam7 protein
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
ela
Eutypa lata
Pathway
ela03013
Nucleocytoplasmic transport
ela03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ela00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
UCREL1_7341
03015 mRNA surveillance pathway
UCREL1_7341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ela03019
]
UCREL1_7341
Enzymes [BR:
ela01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
UCREL1_7341
5.6.2.5 RNA 5'-3' helicase
UCREL1_7341
Messenger RNA biogenesis [BR:
ela03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
UCREL1_7341
mRNA cycle factors
Common to processing body (P body) and stress granule
UCREL1_7341
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
UPF1_Zn_bind
AAA_11
UPF1_1B_dom
AAA_30
AAA_19
ResIII
DEAD
UvrD-helicase
NPHP3_N
Helicase_RecD
PIF1
SLFN-g3_helicase
AAA_22
nSTAND3
ATPase
SRP54
AAA_16
Motif
Other DBs
NCBI-ProteinID:
EMR65673
UniProt:
M7SMP3
LinkDB
All DBs
Position
Unknown
AA seq
1070 aa
AA seq
DB search
MEGAFTHLGNHLVSDSAAAINAGDDDLSTLDPDESLLYPKYAGRGGLGNARRRNDDDDNE
TEVFDDDDTESMASVPVGAMKGLNLKSPEEDKKLPPHACAARGNASSSHIVNHLVRARHK
EVQLHPQSTLGDTTLECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAATPSSKDMSWDI
SRWQPLIEDRAFLPWLVSPPSDNEQLRARHLTPPMIAKLEEMWKDNANATVADLEKAASI
DDDPLPVLLKYEDPFQYQNIFGPLVKMESDYDKKLKEAQSEEGLIVRWDMGLNNKHLASF
TFPKLESGDVKLAVGDEMRLKYKGELRPVWEGVGYVVKIPNNQSDEVTLELRKTGNDKSV
PTECTHNFSADYVWKATSYDRMQAAMKTFAVDEMSVSGYIFHKLLGHEVAVAPMKTNLPK
KFSVPGLPELNSSQISAIKNVLSTPLSLIQGPPGTGKTVTSATIIYHLAKMNNGQVLVCA
PSNVAVDQLCERINLTGLKVVRLTAKSREDVESSVSFLALHEQVRMLDTNPELMKLSQLK
SELGELSSQDEKKFKQLTRAAEREILVNADVVCCTCVGAGDPRLARMKFRNVLIDESTQS
AEPECMIPLVLGCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVRLSLTPIRLNIQ
YRMHPCLSEFPSNMFYEGSLQNGVSAPNRLRKDVDFPWPVADTPMMFWSNLGNEEISASG
TSYLNRTEASNVEKVVTRFFKAGVRPGDIGVITPYEGQRSYIVNTMQNTGTFKKETYKEV
EVASVDAFQGREKDFIVLSCVRSNDNQGIGFLSDPRRLNVGLTRAKYGLVIIGNPKILAK
HDLWHHLLVHFKERKCLVEGPLTNLQTSLLQFSKPKNSFRQRPQQTSYVSSGYSNGRQAT
YNGHSANQDFDSNSMMSFIPDDVSSLHSSSLGGAGLANTAFPQMFSSFNPEQWPGLPGFN
PAPGSRVGGKRQARGTESIAGESVATSEFTEGTASVIGGKGVGQGGVSLGAGLQDALRAR
PTSYTQSDRLKQFVENSARPGYANGFGRRYDDDEKSVSTAFASQIGSGFD
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgcatttacccatttaggtaatcatctcgtttccgactcggccgccgctatc
aatgctggtgatgatgacctatctacacttgatcccgacgagagcctgctctaccctaaa
tatgctggtcgaggaggactaggtaatgcgaggcgccgaaacgatgacgatgataacgaa
accgaggtttttgacgatgacgataccgaatccatggccagtgtcccggttggtgctatg
aagggcctgaacctcaaatcccctgaggaggacaagaagctgccccctcatgcttgcgct
gctcggggaaatgcgagctcctcccacatcgtcaatcatctggtgcgagctcgtcacaag
gaggttcagctccatcctcagtcaactcttggagataccaccctcgaatgctataactgc
ggtactaaaaacgtctttttgctcggttttattcctgccaagtccgataccgtcgtcgtc
ctgctctgtcgacagccttgtgccgctactccgtcctccaaggatatgagctgggatatt
tctagatggcagcccctaatcgaagatcgtgcctttctgccttggctcgtttctccgcct
agcgataacgaacagcttcgcgctcgccacttaacgcccccgatgatcgcaaagttggag
gaaatgtggaaggacaacgcgaacgcgactgttgctgacctcgagaaggcggctagcatc
gatgacgaccctcttccagtactactcaaatatgaggacccctttcaataccagaatatc
tttggacctctcgtgaagatggagtcggactatgacaagaagctgaaggaggcgcagtcc
gaagagggattgatcgtccgctgggatatgggtctcaacaacaaacacctagcgagcttt
acattcccaaaattggaatccggcgatgtcaaattggctgttggagatgaaatgcgactc
aaatacaagggagagctccgtcctgtttgggaaggtgttggctatgttgttaaaatcccc
aacaaccaatccgatgaagtcacactggaactacgaaagaccggcaacgataagtcggtg
ccgaccgagtgcacccataacttctccgcagactatgtatggaaagccacttcatacgat
cgaatgcaggctgccatgaagacgttcgccgtcgatgagatgagcgtgtctggttacatc
ttccacaagctgctgggtcatgaagttgcagttgctcccatgaagaccaacctacctaag
aagttcagtgtgcccggtcttcccgagctgaacagcagccagattagcgcgattaagaat
gtcttgtctactcctcttagcctgattcaaggtcctcccggaaccggaaagactgtcacc
tctgctaccattatctaccacctggctaagatgaataatggtcaggtccttgtgtgcgca
ccatcaaacgtggctgtcgaccagctgtgtgagaggatcaaccttacaggcctcaaggta
gttcggctcactgctaagtctcgcgaggatgtcgaatcttccgtcagctttcttgctcta
catgaacaagtccgcatgctggatactaacccagagttgatgaagctgtctcagctaaag
agtgaactcggcgagctttccagccaagacgagaagaaattcaaacagctaaccagggcc
gctgaacgtgaaattcttgtcaacgcggatgttgtctgttgcacttgtgttggtgccggt
gacccgcgtctggccaggatgaagttccgcaacgtacttattgacgagtctacacaatct
gcagagcccgagtgcatgattcctcttgttctcggctgcaagcaggtagtccttgtagga
gaccacaaacagcttggcccggttatcatgaataagaaagctgccaaggctggtctcaac
cagtcgttattcgagcgtctcgtcagactcagccttacgcctattcgtctcaatatccaa
taccgaatgcacccttgcctttccgagttcccctccaacatgttctacgagggttccctc
cagaatggtgtttcggccccgaaccgacttcgaaaggacgttgacttcccttggcctgtg
gctgatacccctatgatgttttggtccaatctcggcaacgaggaaatttcagcatctgga
acctcgtatctcaaccgcacagaagcttctaatgttgaaaaagtggtcactcggtttttc
aaagctggtgtccgtcccggtgatattggcgttattactccatacgagggtcagcgaagt
tatatcgtgaatacgatgcagaatacaggcaccttcaagaaggagacatacaaagaggtt
gaggttgcatcggtggatgccttccaaggccgtgagaaagacttcatcgtcttgtcttgc
gtccgatccaacgataaccagggcatcggtttcctttctgatccacggcgactgaacgtc
ggcctaactcgagcaaaatatggactagtcatcatcggaaatcccaagatattggccaag
cacgatctctggcaccacctccttgttcacttcaaggagcgcaagtgcttagtggaaggt
ccgctcactaatctgcaaacttcgctacttcagttcagcaagcccaagaatagcttccgc
caacgacctcaacagacttcttacgtctcgagcggttactctaatgggcgtcaggctaca
tacaacggccactctgccaaccaagatttcgattcgaactccatgatgtctttcattcca
gacgatgtatcgagtctccacagctcttcgcttggcggggctggcttggccaacactgca
tttccacagatgttctctagcttcaacccagagcaatggcccggtctgcctggcttcaat
cctgctccaggtagtcgcgtaggaggcaaaagacaagctcgcggcactgagagcatcgct
ggagagagcgttgctacctccgagttcactgagggtacggctagcgtcataggagggaag
ggtgtcggacagggtggcgtcagccttggtgctgggcttcaagatgctctccgtgctcga
cctacgtcctacactcaaagtgatcgccttaagcaatttgttgaaaactcggcccggccg
ggatacgccaatggtttcggacgccgatatgatgacgacgaaaagagcgttagcaccgcc
tttgctagtcagattggtagtgggtttgattga
DBGET
integrated database retrieval system
