Eutypa lata: UCREL1_8254
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Entry
UCREL1_8254 CDS
T03103
Name
(GenBank) putative exosome complex exonuclease rrp protein
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
ela
Eutypa lata
Pathway
ela03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ela00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UCREL1_8254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ela03019
]
UCREL1_8254
Messenger RNA biogenesis [BR:
ela03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
UCREL1_8254
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-ProteinID:
EMR64781
UniProt:
M7T4P4
LinkDB
All DBs
Position
Unknown
AA seq
874 aa
AA seq
DB search
MDPSQDFKSLQENIQAALITATRTTNQLAAEDLSFQKTSNPAVEDHLDETNAHLLELASS
LIKSAAKGTDLKASELEDADDIDVHWSRIVDVVDTLLEKADTCLDEYTGLIKRKAAPTEE
TGPLPKKSKSHNLDHSIRRANILKPQNIFEVKANNFDTSPWKPLLTTKPHALVPLDESLK
TFTDENQSTQYDYSIFLPYFLLQGPLERQVSVTPEEEAKNKRLFLKKRNQKLNELKCKGS
VRGADGSFRYKHPYETEILNLKYPEHVFQTREPIKYQPIESTTAIYVDTYEGVLEMLEEL
KQATEIAIDTEHHDFRTYYGLLSLMQISTREKDWIIDTLQPWRHKLEVLNEVFADPKIVK
VLQGAYMDILWLQRDCGLYIVGLFDTYEAAVSLGYPGRGLAYLLKRFVDFDADKKYQLAD
WRIRPIPEEMFYYARSDTHYLLYIYDMIRNELLENSDRSNPELDLISQVLDRSKETSLRR
HEKIAYDAEGGHGAFGWLNLLIKNSSGTFSKEQFAVFRAVHKWRDDVARREDEDPLFILP
NGTLFDIARRLPPDPKALHSTFGHNTSHVAKREVADLFKVIAKAKAEGINGPSVVDVFRR
TSTTSSVAIGAVAQSVFPQLRNSEKDNVLETEELVSQNSQLWGKVTLSSRWDEGSASVNK
PAQSLHFSLPWAHMLEDVTIGTDQLPDIAKTASTEATDRLNAAPQAEPNVEEKVESEFTL
KTGRKRKAPQSESEDEDDEIEIEESSKRNAAEEMEVDSEEEKAARKKAKKAEKLARKKEK
VAAKKAAKRAAREAKNFEGLPDGEAEEEEDYQPFDYTQAQSVFNTKRGGANGKAGADAKA
AKFNPYTNAMMADGPKPARRMHGEKTGKSATFKR
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggatccctctcaggacttcaagtcccttcaggagaatattcaggccgccctaatcact
gccacgcgaaccaccaaccagctcgccgccgaagatctcagctttcagaagacaagcaac
cccgccgttgaggaccacttggacgagacgaacgcccacttactagaactggcttcgtcg
ctgattaaatctgctgccaagggaacagatttgaaagcttccgagctagaggatgccgac
gatattgacgttcactggtcgcgcatcgtagatgtggtagatactctccttgaaaaggct
gacacttgcctcgacgaatataccggcctgataaaaaggaaggccgccccgactgaggaa
actggtccactgccaaagaaatccaaatcccataatctcgatcattcgatccgacgggcc
aacatcctcaaaccacaaaacatcttcgaggtcaaagctaacaacttcgatacatctccc
tggaagcccctgctcacaacgaagccacacgccctcgtcccgctcgatgagagtctaaag
acattcaccgatgaaaatcagtccacacagtacgactattccatttttctgccttacttt
ctgttacaggggccgctagaacgacaagtgtcggttacccctgaagaagaagcaaagaat
aagaggttattcctcaagaagcgaaatcagaagttgaatgaactgaaatgcaaaggttca
gtccgaggagctgacggcagtttcagatacaagcacccctacgagacagaaatcttaaat
ctcaaatacccggaacacgtttttcagacgagggagcccatcaaataccaaccgatcgag
agtacgaccgccatctatgtcgatacctacgaaggtgtgcttgagatgctcgaggagctc
aagcaagctaccgaaatagctatcgatacagaacatcatgatttcagaacttactatggc
ttgctctctctcatgcagatcagtacgcgtgaaaaggattggattatcgatacactccag
ccatggcgccataagctcgaggtcctaaatgaggtgttcgccgaccctaagattgttaag
gtcctgcaaggtgcttatatggatatactatggctccaaagagactgcggtctgtatatc
gttgggctattcgatacttatgaagccgcagtgtccctggggtatcccggacgagggttg
gcctatctcctcaagcggtttgtcgattttgatgccgacaagaagtatcaattagctgac
tggagaatacggccaattcccgaagaaatgttctactatgcacgctcagatacccactac
ctcctctatatctacgacatgattcggaacgagctcttggaaaactccgacagaagcaat
ccagagttggacttaatcagccaagttctagatcgatccaaagagacatcattgcgacga
cacgaaaagattgcgtatgacgctgaggggggtcatggagctttcggctggctcaatctg
ctcatcaaaaactcatctggcacgttttctaaagaacagttcgccgtattccgtgcagta
cacaaatggcgagacgatgttgcacgtcgcgaggatgaagatcctctttttatcttgccc
aatggaaccctattcgatatagctaggcgcttgccaccagacccgaaagctttgcatagc
acatttggtcataacacatcccatgtggctaaacgtgaggttgctgatcttttcaaagtc
atcgcaaaagccaaggctgagggtataaatgggcctagtgtggttgacgtctttcgtcgt
acttcaacgacgtcctcggtggctatcggcgcagttgctcagtcggtgttccctcagcta
agaaacagcgagaaagacaatgtcctagaaaccgaggagctagtctcacaaaactcacag
ctatggggcaaagtaactctcagcagtcgatgggatgagggttcagctagcgttaacaaa
cctgcacaatccttacacttctcactaccgtgggctcatatgctagaagatgtaactatc
ggtactgatcaactacccgacatagccaagacagcgagcactgaggctacagatagactc
aatgctgcgccccaggcagaacctaatgtggaagagaaggtggagtctgaattcacgctt
aagaccggtcgcaagcgtaaagctccacagtccgaatccgaagacgaagatgatgagatt
gagattgaggagtctagcaaacgcaatgccgccgaagagatggaggtcgactccgaggaa
gaaaaggccgccaggaagaaagccaagaaggcagagaagctggcgcgaaagaaggagaaa
gtcgcggccaagaaggctgcgaagagggcggctagggaggctaagaattttgaaggcctc
cctgatggtgaggctgaggaggaggaggactatcagccgttcgattacacccaggcccag
tcggtcttcaacaccaagcggggtggtgccaacggcaaggcaggtgcggatgcgaaggct
gctaagttcaacccatacaccaatgccatgatggccgacggacctaagcctgctcgccgg
atgcacggtgagaagacgggtaagagtgccactttcaagagatga
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integrated database retrieval system
