Eutypa lata: UCREL1_9279
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Entry
UCREL1_9279 CDS
T03103
Name
(GenBank) putative pre-mrna-splicing factor syf1 protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
ela
Eutypa lata
Pathway
ela03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ela00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
UCREL1_9279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ela03019
]
UCREL1_9279
03041 Spliceosome [BR:
ela03041
]
UCREL1_9279
Messenger RNA biogenesis [BR:
ela03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
UCREL1_9279
Spliceosome [BR:
ela03041
]
Complex B
Other components
Prp19-related factors
UCREL1_9279
Complex C
UCREL1_9279
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
Mad3_BUB1_I
TPR_15
ARM_TT21
SHNi-TPR
Motif
Other DBs
NCBI-ProteinID:
EMR63767
UniProt:
M7SHZ5
LinkDB
All DBs
Position
Unknown
AA seq
854 aa
AA seq
DB search
MPPNGLTNGSHATRKPDLHLVSDEDAVYEQDVLRDSGSTKPWLAYIQFKFQHGTIQEQAF
VLERACLQLPRSYKLWKIYLQFRTKHVSKLNAAVFAAEYKKVNALFEKALILLNKMPRIW
EMYLKFLLQQPLVTLTRRTFDRALRALPITQHNRIWALYRPFANSAAGETAVKIWRRYMQ
VHPEDAEDFIELITQVGLYTEAVKKYIDILNNPRFNSKQSKGHYELWSEMVDLLVEHANE
VETGHETGIDVERIIRSGIDRFADQRGKLWCGLATYWIRRGSFERARDIFEEGITTVMTV
RDFTLIFDTYAEFEESIIGALMELASNRTEEGKVDEDADFDLDIRMLRFEQLMDRRPFLL
NDVLLRQNPNNVAEWEKRVALWGDNKEEVVQTYTDAIAAIQPKKAVGAFHLLWANYAKFY
EKGGDIRSARVIMEKAVKVPFKSVAELADMWIEWAEIELRNENFDDAVRIMAKAVQAPKR
STVDYFDETLSPQQRVHKSWKLWSFYVDLVESVSSLDETKKVYERIFELRIATPQTVVNY
ANLMEEHKYYEESFKIYERGLDLFSYPVAFELWNLYLTKAVDRKISIERLRDLFEQAVED
CPPKFAKVLYLMYGNLEEERGLARHAMRIYERATRAVSDEDRADMFNFYITKSASNFGLP
STRPIYERAIAALPDEEARDMCLKFADMEKRLGEIDRARAIYGHASQFCDPRTNPAFWSK
WEQFEVQHGNEDTYKEMLRIKRSVQAQYNTDVNFIASQAIARSQAARAESNGTTTTTTNG
GGGGGANGSGSVDPEVADAMEQLERQARAPVGFVAASTNISGTIPTSTDKDPQQQQPPAN
PDAIDIDNMDDDVD
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccaacggcctgacaaatggctctcatgccaccagaaagccagatctccaccta
gtcagtgacgaggatgccgtgtacgaacaagatgtcctacgagattctggcagcacgaaa
ccttggttggcctacattcagtttaagttccagcatggcaccattcaagaacaagccttc
gtgctcgagcgagcctgtctacaattaccgcgttcgtataaactttggaagatatatctc
caattccgaaccaagcatgtttcaaagttaaacgccgcagtatttgctgccgaatacaag
aaggtcaatgcgcttttcgagaaagcgttaatcttgcttaataagatgccccggatatgg
gagatgtacctcaagttcttgctccagcagcccttggttaccttgacacgacgaactttc
gaccgagcattacgtgcacttcctataacacaacataacaggatatgggctctctaccga
cctttcgcgaactctgccgccggggaaactgccgtgaagatctggaggaggtatatgcag
gtccatcccgaagatgccgaagatttcatcgagctcataacacaagttggcttgtatacc
gaggcggtcaagaaatacatcgatatactcaacaatccacgtttcaacagcaaacagagc
aagggccactacgaattgtggagcgagatggttgatctgcttgtagaacacgctaacgag
gtcgaaacgggccatgagactggcatcgacgtcgagcgtattattcgaagcggaatcgat
aggtttgccgaccagagggggaagctgtggtgtggtttagccacttactggatccgacga
gggagcttcgagcgcgcaagggacatattcgaagaaggtatcacgacggtcatgacggtt
cgcgattttacgcttatcttcgatacctatgccgagtttgaggaatcaataatcggtgcc
ttgatggagctagcatcgaatcgaactgaagagggaaaggtcgacgaggacgctgatttt
gacctcgacatacggatgttacgtttcgaacagctcatggatcgccgaccattcctattg
aatgatgtcttgctacgacaaaatcctaacaatgtcgcagaatgggagaagcgggtcgct
ctctggggagacaacaaggaggaagtggtacagacatatacggacgccattgcagcaatc
cagccgaagaaggctgttggcgctttccacctgctgtgggctaactatgctaaattctac
gagaaagggggagatatacggagtgcaagggtgattatggagaaggctgttaaagtgcca
ttcaagtccgttgctgagcttgctgatatgtggatcgaatgggccgaaatagagctccgc
aacgagaacttcgacgatgccgtacggattatggctaaggccgtccaggcaccaaaacgg
tccacggtggattatttcgatgagactctttcaccacaacaaagggtacataaaagctgg
aagctttggagcttctatgtcgatctagtagagagtgtgagttctcttgacgagacaaag
aaggtttacgaacggatattcgaactacggatagccacaccacagacggttgtcaactac
gccaaccttatggaagaacataagtattacgaagaatcattcaagatatacgagcgggga
ttagatcttttcagctaccccgtcgcctttgagctatggaacctgtacttgacgaaggcg
gttgaccgcaagatcagcatcgaacgcctccgagatctcttcgaacaagcggtggaagat
tgtccgcctaagtttgccaaggtactgtatctcatgtacgggaacctcgaggaggaaaga
gggctcgcgaggcatgctatgcgcatctacgagcgggcgacgcgggcggtgtcggacgag
gaccgggccgacatgttcaacttctacatcacgaagtcggcgtccaacttcgggctgccg
tccacgcggcccatctacgagcgggcgatcgcggcgctgcccgacgaggaggcgcgcgac
atgtgcctcaagttcgcggacatggagaagcggctgggcgagatcgaccgggcgcgcgcc
atctacgggcacgcgtcccagttctgcgacccccgcaccaacccggccttctggtccaag
tgggagcagttcgaggtccagcacggcaatgaggacacctacaaggagatgctccgcatc
aagcgcagcgtccaggcccagtacaacaccgacgtcaacttcatcgcgtcccaggccatc
gcccgcagccaggccgcgcgcgccgagagcaacggtacgacgacgacgacgacgaacggc
ggcggcggcggcggtgccaatgggagcggaagcgtcgaccccgaggtcgccgatgcgatg
gagcagctcgagaggcaggcccgtgcccctgttggtttcgtggccgctagcacgaatatc
tcgggcaccatacccacttctaccgacaaggatccgcagcagcagcagcctccggctaat
ccggatgccatcgatattgacaacatggacgacgacgtagactag
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