Eutypa lata: UCREL1_9383
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Entry
UCREL1_9383 CDS
T03103
Name
(GenBank) putative pre-mrna splicing factor rna helicase protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
ela
Eutypa lata
Pathway
ela03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ela00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
UCREL1_9383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ela03041
]
UCREL1_9383
03009 Ribosome biogenesis [BR:
ela03009
]
UCREL1_9383
Enzymes [BR:
ela01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
UCREL1_9383
Spliceosome [BR:
ela03041
]
Complex A
U2 snRNP components
U2 related factors
UCREL1_9383
Complex B
UCREL1_9383
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
UCREL1_9383
Ribosome biogenesis [BR:
ela03009
]
Eukaryotic type
90S particles
Helicases
UCREL1_9383
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
OB_NTP_bind
DEAD
AAA_22
AAA_19
HA2_C
Flavi_DEAD
ResIII
Helicase_RecD
nSTAND3
DUF1424
Motif
Other DBs
NCBI-ProteinID:
EMR63637
UniProt:
M7SHP6
LinkDB
All DBs
Position
Unknown
AA seq
701 aa
AA seq
DB search
MESFKRNQTTAEQARKVEDGEINPLTKKPFSAKYRQLLGVRRQLLVYGKREEFLDVYHKA
RVLLVTSETGSGKTTQIPQFVLYDEFDSGMKIVCTQPRRLAATSVARRVAEEMDVALGKE
VGYSVRFDSQSDDKTRLKYVTDGLLLREILNDRSMSRYSCIIIDEAHERTVATDLLMAIL
KETLRLRQDFKVIIMSATLDATKFQSYFRDAPLLHIPGRAYPVETRYLKGGSSNILYQVL
NTVKYIHENQAKGDILVFLPGEDEIECACMDIRKNTSMLDVMPLYSALSMQEQQRVFSSF
TNRKCIVATNIAETSLTIDGIVYVVDSGLAKERNHNPRACLETLQVAPISQAAANQRAGR
AGRTQPGKCFRLYGEKEFNTVLLKSTKPGILRDNARSTILQVMLVNKDILAFDFIDRPHP
EIFLRAIGELVDWNFIDNGEITLSGRTAATFPLDPMWYHAIMVAQEIGCGADMTAIAAVS
STQQSIFHRPHPHQTVANLARTQFAHPLSDHITYLNAFHAFVVAKRGEKVDMDQWCFDHF
LRRQALEEASQIRLQLQDELERRMRAHLTRTPFSNPNYFTNIRRALALGLFNQSAIKVKS
KNSLGARTGVGLYKTTHQNQHALLRPESTLIDGDHEWVVYSSFEQSGRQYLSTATAIDPA
WIVELPYFQDDMLLKTFGTDEFKQNYVKNSLDQARERIQKS
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggagtcattcaagagaaaccaaacgacggcggagcaggcaagaaaggtggaggatgga
gagatcaacccgcttaccaagaagccgttttcagctaaatatcgtcaacttcttggcgtt
agacgacaacttcttgtatacgggaagcgggaggaattcttggatgtctaccataaagca
cgtgtcctgctagtcaccagtgagacgggctcggggaagactactcaaatcccccagttc
gtcctttacgacgagtttgattcaggtatgaagattgtctgtactcaaccgcggcgattg
gctgcaacatctgtggcaaggcgtgtcgccgaagagatggacgtcgctctcggtaaggaa
gtaggctacagcgtccggtttgatagccagagcgacgacaagactcgcctcaagtacgtg
acggacggactgttgctccgtgaaatcttgaatgaccgctcgatgtcacgctatagctgc
atcatcatcgacgaggcgcacgaaaggaccgtagcgacggacttgttgatggccatactc
aaggagacacttcgtcttagacaagacttcaaagtcatcatcatgtccgcaacgctcgat
gcgaccaaattccagtcatactttagagatgctcctcttctccacattcctggtcgcgcc
tatccagtcgagacccgatatctaaaggggggttcctctaacattctttaccaagttctc
aatactgtcaagtacatccacgagaaccaagctaaaggtgatatcctggtcttcctacct
ggggaggacgagatcgagtgcgcctgcatggatatcagaaagaatacgtcaatgcttgac
gtgatgccgctatattcggcactttcgatgcaagagcagcaacgagtcttctcctcgttt
accaacaggaaatgcatcgtggctaccaacattgccgagactagcttgactatcgacggt
attgtttatgttgtggattccgggctcgccaaagagagaaaccacaacccaagagcctgt
ctggagacgctgcaggtggccccaatatctcaggctgctgcgaaccaacgagctgggaga
gctggacgtacgcaacccggcaaatgctttagactgtatggtgagaaggagttcaacacg
gtcctcctcaaatcgacaaagccgggaattctccgagacaacgcaaggtctaccattctc
caggtcatgctggtcaataaggacatccttgccttcgattttattgaccgacctcatccc
gagatcttcctacgagcaatcggagagctcgttgactggaacttcatcgacaatggagaa
atcacgctcagtggccgtacggctgcgacatttcctttagacccaatgtggtaccatgcc
atcatggtggcgcaagaaatcgggtgtggtgctgacatgactgccatcgcggccgtatca
agcacccagcaatcaatattccaccgcccgcacccccatcagacggtggctaacctggca
agaacgcaatttgctcacccactgtctgaccacatcacgtacttaaatgcatttcatgca
tttgtcgtagctaagaggggggagaaggtcgacatggatcagtggtgttttgatcatttc
ttgcgccgtcaagcgttggaggaggcctctcaaattcgcctccaactccaggatgaattg
gagagaaggatgagggcccacctcaccaggaccccgttctccaacccgaactacttcacc
aacatccggagagcgttagcattgggcctctttaaccagagtgccatcaaggtcaagtcg
aagaattctctgggcgcccgaactggggtgggcttgtacaagacaacccaccagaaccag
cacgcactcctccgcccagaaagtaccttgatcgatggagatcacgagtgggttgtgtac
agcagctttgagcaatctggaaggcagtatctgagcactgctactgccatcgacccagcg
tggatagtcgagttgccgtacttccaagatgacatgctactaaagacgttcggtaccgat
gagttcaaacaaaactacgtgaaaaactccctcgaccaagcccgcgaaaggatccaaaag
tcgtag
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