Enterococcus lactis: I4Q40_00975
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Entry
I4Q40_00975 CDS
T07069
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
elac
Enterococcus lactis
Pathway
elac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
elac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I4Q40_00975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
elac03019
]
I4Q40_00975
03009 Ribosome biogenesis [BR:
elac03009
]
I4Q40_00975
Enzymes [BR:
elac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
I4Q40_00975
Messenger RNA biogenesis [BR:
elac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I4Q40_00975
Ribosome biogenesis [BR:
elac03009
]
Prokaryotic type
rRNA helicases
I4Q40_00975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QPL60263
LinkDB
All DBs
Position
194724..196235
Genome browser
AA seq
503 aa
AA seq
DB search
MKFKELELSPELLKSVERAGFEEATPIQAETIPLALAGKDVIGQAQTGTGKTAAFGLPML
EKIDPDRHELQGLVIAPTRELAIQTQEELYRLGRDKKVRVQAVYGGADIGRQIRGLKDRP
HIVVGTPGRMLDHINRHTLKLGTVQTLVLDEADEMLNMGFLEDIEKIISQVPEQRQTLLF
SATMPPAIKNIGVKFMKSPHHVKIKAKEMTADLIDQYYVRAKEYEKFDIMTRLFDVQTPE
LTIVFGRTKRRVDELARGLEARGYRAEGIHGDLSQQKRMSVLRSFKNGHLDILVATDVAA
RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKGGMSVTFVTPNEMDYLHVIENLTKK
RMTTLRPPTEKEAFKGQLGAAVEQIETKLAENGLDKYLQTADKLLEEYSAQDLVALLLKT
TAKDPADAVPVKITPERPLPMQKKGYNKNGKRGGGNNRNRRDGGNYRGNKSKGGYSKNNN
SQKDGGKRHNDKKRGFVIRSNND
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatttaaagaactagaattatcaccagaattgttgaaatcagtcgaacgcgctggt
tttgaagaagcaacacctatccaagcagaaacgattccgctagcattagctggaaaagac
gttattggacaagcacagacaggtacagggaaaacagctgcatttggattaccaatgtta
gaaaaaatcgatccagatcgtcacgaattacaaggtctggttatcgcaccaacacgtgaa
ttagctatccaaacacaagaagaactatatcgtttagggcgcgacaaaaaagtgcgtgta
caagctgtctatggtggagcagatattggccgtcagatccgtggcttgaaagatcgtcca
catatcgttgtgggtacaccaggacgtatgcttgaccacatcaaccgccatacattgaag
cttggaactgttcaaacattagtcttggatgaagcagatgaaatgttgaatatgggcttc
ttggaagatatcgaaaaaatcatttctcaagttcctgagcaaagacaaacattacttttc
tcagcaacaatgccgccagccatcaagaatatcggcgttaaattcatgaaaagtccacat
catgtgaagatcaaagcgaaagaaatgacagctgacttgatcgatcaatactatgtccgc
gcaaaagaatacgaaaaatttgatatcatgactcgcttgtttgatgttcaaacaccggaa
ctaacaatcgtcttcggacgtacaaaacgccgcgtagatgaattggcacgcggattagaa
gcacgtggttatcgtgcagaaggaatccatggcgatttgtctcaacaaaaacggatgagc
gtattgcgttcattcaagaacggtcatttagatatccttgtagcgacagacgttgccgca
cgtggattagatatctcaggtgtcactcatgtgtacaactatgatatccctcaagatcca
gaaagctacgttcaccgtatcggacgtacaggtcgtgccggaaaaggcggtatgtctgtg
actttcgttacaccaaatgaaatggactacttgcatgtgatcgaaaacttgacgaaaaaa
cggatgacgactttacgtccgccaactgaaaaagaagcattcaaaggtcaattaggtgct
gcagttgaacaaatcgaaacaaaacttgcagaaaacggtctagataaatacctgcaaaca
gcagataaattattagaagaatattctgcacaagatttggttgcattactgctgaaaacg
acagcaaaagatccagctgatgcagtaccagtgaagatcacacccgaacgtccattgcca
atgcagaaaaaaggatacaacaaaaatggcaaacgtggcggcggaaacaaccgtaatcgt
cgtgacggcgggaattatcgtggaaacaaatcaaaaggcggatatagcaaaaataataac
agccaaaaagatggcggtaaacgtcacaatgataaaaaacgcggatttgtgatccgttca
aataacgattaa
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