KEGG   Enterococcus lactis: I4Q40_05420
Entry
I4Q40_05420       CDS       T07069                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
elac  Enterococcus lactis
Pathway
elac03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:elac00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    I4Q40_05420 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:elac03400]
    I4Q40_05420 (uvrA)
DNA repair and recombination proteins [BR:elac03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     I4Q40_05420 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      I4Q40_05420 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_16 nSTAND1 RsgA_GTPase AAA_29 AAA_22 nSTAND3 AAA_33 AAA_23 AAA_25 Viral_helicase1 ATPase NACHT DnaJ_CXXCXGXG AAA_14 AAA_24 cobW NB-ARC Septin RNA_helicase MMR_HSR1 BCA_ABC_TP_C MeaB DUF87 PRK DUF463 Dynamin_N Frankia_peptide NTPase_1
Other DBs
NCBI-ProteinID: QPL61085
LinkDB
Position
1132949..1135765
AA seq 938 aa
MANDKITIHGARAHNLKNIDVTIPRDKFVVVTGLSGSGKSSLAFDTLYAEGQRRYVESLS
AYARQFLGQMDKPDVDSIDGLSPAISIDQKTTSKNPRSTVGTVTEINDYLRLLFARVGHP
ICPNDHIEITSQSVDQMADQVMDLPERTKIQVLAPIVVKKKGQHKKIFERIQKEGYVRVR
VDGEIYDLSEVPELEKNKKHDIAIVIDRIIVKEGIRSRLFDSLEAALRLADGYALVDVIG
EEEMLFSEHYACPYCGFTVGELEPRLFSFNAPFGACPDCDGLGVKLEVDQDLVIPDRTKT
LSQGAIVPWNPISSQYYPQMLAQACESFGIDLDTPFEELPEEHQEIILNGTDELFHFHYE
NDFGGVRDVETTFEGVLKNIERRYHDTNSDFTREQMRLYMTELTCQTCKGYRLNPQALSV
QINGTNIGQTNELSIQKAVDFFSNLTLSEQEKVIAKPILKEVNDRLSFLENVGLDYLTLS
RASGTLSGGEAQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNDRLIGSLKKMRDLGNTL
VVVEHDEDTMWAADYLIDVGPGAGEQGGQIVAAGTPEEVANDENSLTGKYLSGKKSIPVP
KERRKGNGKAIKITGASENNLKNISVEFPLGEFVAVTGVSGSGKSTLVNSILKKSLAQKL
NKNSAKPGKFKTISGYESIEKIIDIDQSPIGRTPRSNPATYTSVFDDIRGLFAQTNEAKM
RGYKKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEVCHGKRYNSETLEVHYKGK
SIADVLEMTVEDAVEFFKHIPKIHRKLQTIVDVGLGYVTMGQPATTLSGGEAQRMKLASE
LHKISNGKNFYILDEPTTGLHSDDIARLLQVLQRLVDAGNTVLVIEHNLDVIKTADHIID
LGPEGGEGGGTILATGTPEEIIDVKESYTGHYLKKIMV
NT seq 2817 nt   +upstreamnt  +downstreamnt
atggctaacgataaaattacgattcatggtgcacgtgcccataacttgaaaaatatagat
gtcacgattccacgagacaaattcgtggtcgttacaggtttgtccggttctggaaaaagt
tccttagcatttgatacactgtatgccgaaggacagcggagatacgtagaaagtctttct
gcgtatgcccgccagtttttaggtcaaatggataaaccagatgtagacagcatcgacgga
ttgagtccggcgatttctattgatcagaaaacaacaagtaaaaaccctcgttcgacagta
ggtactgtgacggaaatcaatgactatttacgcttgttgtttgctcgtgtaggacatccg
atttgtcccaacgatcatatcgagattaccagtcaatcagtagatcaaatggcagatcaa
gtaatggatttgcctgagcgcacaaagatccaagtattggcaccgatcgtggtaaagaaa
aaaggacaacataaaaaaatattcgaaagaatccaaaaagagggatacgtccgcgttcga
gtcgatggtgaaatctatgatttaagtgaagtgcctgagctggagaaaaataaaaaacat
gatatcgcgatcgtcatcgaccggatcattgtgaaagaagggattcgttctcgtctattt
gattctttagaggcagccttgcgactggcagatggctatgctttggttgatgtgattggc
gaagaagaaatgttgtttagtgaacactatgcttgtccttattgcggatttactgttggt
gaactagaaccaagactgttctccttcaatgcgccttttggagcttgtccagactgtgac
ggtttaggcgtcaaattagaagtcgatcaagatttagtcattccagatagaacgaagacg
cttagtcaaggtgcaatcgttccatggaacccaatcagctctcaatattatcctcaaatg
ttagcgcaggcttgcgaaagtttcggtatcgatttggatacaccattcgaagaattaccg
gaagaacatcaggagatcatcttaaatgggacagatgaacttttccatttccattatgaa
aatgattttggtggcgttcgcgatgtagaaacaactttcgaaggagtattgaaaaatatc
gaacgtcgttatcatgatacgaacagtgatttcacgcgtgagcaaatgcgtctttatatg
accgaattgacttgtcagacgtgtaaaggttatcgtttgaatcctcaagcattatctgtt
caaatcaatggaacgaatattgggcaaacaaatgaattgtctatccaaaaagcagtagac
ttcttctcaaaccttacattatctgaacaagaaaaagtgattgccaaaccgattttaaaa
gaagtaaatgacagactttcattcttagaaaatgtcggattagactatctaaccttgagt
cgtgcttctggaacgttatctggaggagaagcacagcgaatcagattggctacgcaaatt
ggatcgaatctttctggagttctgtatattttagatgaaccatcgatcggattgcatcaa
cgcgataatgatcgactgattggctcattgaagaaaatgcgtgatcttggcaatacactc
gttgtggtcgaacatgatgaagatacgatgtgggcagcagattatctgattgacgtcgga
cctggagcaggggaacaaggcggacaaatcgttgctgcaggtactcctgaagaagtagct
aatgatgaaaattctttgacagggaaatatctttcagggaaaaaatcgatcccggtgcca
aaagaacgccgtaaaggtaatgggaaagcaatcaagattactggtgcttcagaaaacaat
ctgaaaaatatcagtgtcgaatttcctttaggagaatttgtagcagtaacaggtgtgtca
ggttctggaaagagtacattggtcaatagtatcttaaagaaatcattagcgcagaaatta
aataagaattctgccaagccaggtaaattcaagacaatttccggctacgaaagtatcgaa
aagatcatcgacatcgatcaaagcccaatcggacggacgccgagaagtaatccagcgact
tatacgagtgtctttgatgatatccgtgggttatttgctcaaacaaacgaggcaaaaatg
cggggatataagaaaggtcgttttagtttcaacgtaaaaggcggtcgttgtgaagcgtgt
cgtggggatgggattattaagatcgaaatgcactttttgcctgatgtctatgttccttgt
gaagtatgtcatggcaaacgatataactctgaaacattagaagtacattacaaaggaaaa
agcattgcagatgttttggaaatgacggtagaagatgctgtagaattcttcaagcatatt
ccaaagatccatcgcaaactgcaaacgatcgttgatgttggcttagggtatgtgacgatg
ggacaaccagcaacgacattgtccggcggcgaggcgcaacggatgaaacttgccagtgaa
ttacacaaaatctctaatggaaagaatttctatattttagatgaaccaacgactggtctt
catagcgacgatatcgcccgtttgctgcaagtgttacaaagattagtagacgctggtaac
acagttttagtgatcgaacacaatctagatgtaatcaaaacagccgatcatatcattgat
ttaggaccagaaggcggagaaggcggaggaacgatccttgcgactggaactccagaagaa
atcattgatgtaaaagaaagctatacaggtcactatttgaaaaaaataatggtataa

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