Enterococcus lactis: I4Q40_05600
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Entry
I4Q40_05600 CDS
T07069
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
elac
Enterococcus lactis
Brite
KEGG Orthology (KO) [BR:
elac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
elac03009
]
I4Q40_05600 (rlmD)
Enzymes [BR:
elac01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
I4Q40_05600 (rlmD)
Ribosome biogenesis [BR:
elac03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
I4Q40_05600 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_15
MTS
TRM5-TYW2_MTfase
N6_N4_Mtase
RrnaAD
ComR_TPR
PCMT
Cons_hypoth95
KH_DUF2096_C
Motif
Other DBs
NCBI-ProteinID:
QPL61118
LinkDB
All DBs
Position
1178409..1179782
Genome browser
AA seq
457 aa
AA seq
DB search
MTEQQIVKKNERYTVEIVDLSYEGMGVAKIDGYPLFIENALPGEEVEILVVKAGNKFGYG
KVETFITQSPDRQPVENNALLRTGIAPLAHLKYEQQLVFKQKQVEHVMAKIAKMPEVPVL
PTVGMAEPFGYRNKAQIPVRRIDGQLATGFYKKNSHDLVPIEDFYIQDPVIDQAIKVVRD
ILQRFQVRGYNEEKNEGQLRHIIIRRGHYSHEMMVILVTRKEKFFKSKEIAEAIHEELPE
VVSVIQNINEEKTNVILGDKEKVLYGRDYIEDQLLGKTYRISAKSFYQVNTQQAEYLYQT
AIEFAELDKKDIVIDAYSGIGTIGLSLADRVDKVYGMEVIPEAIEDAQFNALNNKIENVH
YEVGKAEKVMKKWQEKGIKPSVIVVDPPRKGLDHHFIESAIEMSPERIVYISCNPATFAR
DAKLFAEAGYAVKKVQPVDLFPQTHHIELVASFVKGE
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgacagaacagcaaatagtaaagaaaaacgaacgatatacagtcgaaatcgtcgacttg
agttatgaaggaatgggggtagcaaaaatcgatggttatccattgtttatcgaaaatgca
ctccctggagaagaagtagaaatactagtagtgaaagcaggcaataagtttgggtatggg
aaagtcgaaacatttattacacaatctcctgatcgccagcctgtagaaaacaatgcatta
cttcgcacaggtatcgcacctttagctcatttgaagtatgaacaacagcttgtcttcaaa
caaaaacaagtagagcatgtaatggcgaagattgctaagatgccagaagttcctgtactt
ccaactgtcggaatggcagaaccattcggctaccgtaataaagcacagatccctgttcgc
cgtatcgatggacagttagccaccggtttttacaaaaagaatagccatgatctagtccct
atcgaagatttttatatccaagatcctgtcatcgatcaagcaatcaaagtagtcagagat
atcttgcaacggttccaagtacgaggatataatgaagaaaaaaatgaaggacagcttcgt
cacatcattatccgtcgtggtcattattcccatgaaatgatggtcattttagttactcgt
aaagaaaaattctttaaatccaaggaaattgctgaagccattcatgaagaattgccagaa
gtggtttcggtcatccaaaatatcaatgaagaaaaaacaaatgtgattttaggagacaaa
gaaaaagttttatatggcagagactatatcgaagatcagctattaggaaaaacctatcga
atctcagcaaagtcattttatcaagtaaatactcaacaagcagagtatctgtaccaaaca
gccatcgagtttgctgagttagataaaaaagacattgtgatcgacgcttattcaggaata
ggtacgattggcttgtctttagcagacagagtggataaggtgtatgggatggaagttatt
ccagaagcaattgaagatgcacagttcaatgctttaaataataaaatcgaaaatgttcat
tatgaagtcggaaaagcagagaaagtcatgaaaaaatggcaagaaaaagggattaaacca
tctgtgatcgtagttgaccctccacgaaaaggattagatcatcattttattgaatcagca
atcgaaatgtcaccagaacgaatcgtctatatctcgtgtaatccggcaacttttgcaaga
gatgctaagttatttgcagaagcaggttatgccgtgaagaaagttcagcctgtagatctt
ttcccgcaaacccatcatatcgaattagtcgcttcattcgttaaaggagaataa
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