Enterococcus lactis: I4Q40_08310
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Entry
I4Q40_08310 CDS
T07069
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
elac
Enterococcus lactis
Pathway
elac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
elac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I4Q40_08310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
elac03019
]
I4Q40_08310
03400 DNA repair and recombination proteins [BR:
elac03400
]
I4Q40_08310
Enzymes [BR:
elac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I4Q40_08310
Messenger RNA biogenesis [BR:
elac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I4Q40_08310
DNA repair and recombination proteins [BR:
elac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
I4Q40_08310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Helicase_C_2
AAA_30
DUF1398
Motif
Other DBs
NCBI-ProteinID:
QPL59247
LinkDB
All DBs
Position
complement(1722702..1724105)
Genome browser
AA seq
467 aa
AA seq
DB search
MLINELKKYFGFDSFRPGQEEIIQALLDGEDTLAILPTGTGKSLCYQLTGYLTDGMVLIV
SPLLSLMEDQVTQLQKRGEKRVAAFNSLLSRAERGYVLRHLSQYKFLFLSPEMLTNPSLL
EQLKKQDIALYVVDEAHCVSQWGVDFRPEYQQLGKIREHLGNPVTLALTATATDLVAKDI
RQVLFDRQPKEVRQSVNRQNISLFVRKTQQKEQELEQFMESAHGAAIIYCATKKEVERLY
HLFRERFSVGYYHGGLDTAQRRQLQQQFVKNQLQFLIATNAFGMGIDKSDIRYVIHYDLP
DSLENYVQEIGRAGRDQEESAAILLYQSGDERIHYFFNQLSREQRQSFELYLEYAAEQAP
FDELQKKWMELIQQSEKPENWVERLKRQEKEKEFRLQQMLRYIHEEDCRRKFILAYFGEE
LSEKPQNCCDIDGAKVELLPKKKDFSKTEPLHWESILLNLFKKNMEH
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgttaataaatgaattaaaaaaatattttggattcgattcatttcgacccggccaagaa
gaaattattcaggcgttgcttgatggagaagatactctcgctattttgcctacaggaacg
gggaaaagcctgtgctatcaattaacagggtatttaacggatgggatggttctcatcgtg
tcaccgctactttctctcatggaagatcaagtgacacaactgcaaaaacgaggggaaaaa
cgagtagctgctttcaatagcttgctttcgcgagctgaaagaggatacgttctccgtcat
ctgtcgcaatataaatttttatttttgagtccggaaatgttgactaacccttctctttta
gagcagctgaaaaaacaggatatagcgctatatgtagtggatgaggcacattgtgtatca
caatggggagttgattttcggccagaatatcaacagttaggaaaaatccgcgagcattta
ggaaacccggtcacattggctctaaccgcgacagcgacagatttagtagcgaaagatata
cgtcaggtgctatttgatcgacagccaaaagaggttagacaatcagtcaatcgacaaaac
atctcgctttttgttcgaaaaacgcagcaaaaagaacaagaacttgaacaattcatggaa
agtgcacatggtgcggcaattatttattgtgcaacaaaaaaagaagtcgaacgtttgtat
catttattcagggagcgcttttcagttggatattatcacggtggccttgacacagctcaa
agaagacagcttcagcaacagtttgtaaaaaatcagctgcagtttctcattgctacgaac
gcatttggtatggggatcgataaatctgatattcgttatgtgatccattacgatttgcca
gacagtctggaaaactatgtacaagaaatcggtcgagcaggcagagatcaggaagaaagt
gcagcaatccttttatatcaaagtggagatgaacgtattcattatttctttaatcaactt
tctagagaacagcgacaaagttttgagctttatttggaatatgcagcagagcaagcgcca
tttgatgagctgcaaaaaaaatggatggagttgatccagcagtctgaaaaaccagaaaat
tgggtggaacggctcaaacgtcaggaaaaagaaaaagaattccgcctgcagcagatgctt
cgttatatccatgaagaagactgccgcagaaaattcatcttggcttattttggggaagaa
ctttccgaaaagccgcagaattgttgtgatattgatggcgcaaaagtagaacttctacca
aagaaaaaggatttttctaagactgaaccgcttcattgggaatcgattttactaaattta
tttaaaaaaaacatggaacattga
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