Enterococcus lactis: I4Q40_10575
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Entry
I4Q40_10575 CDS
T07069
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
elac
Enterococcus lactis
Pathway
elac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
elac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I4Q40_10575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
elac03019
]
I4Q40_10575
Messenger RNA biogenesis [BR:
elac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
I4Q40_10575
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
RNase_J_b_CASP
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
QPL59646
LinkDB
All DBs
Position
complement(2157160..2158839)
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AA seq
559 aa
AA seq
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MSTIKIIPLGGVRENGKNMYVAEVGEDIFILDCGLKYPENELLGIDVVIPDFTYLEENID
RVAGVFLTHGHADAIGALPYLLSKISVPVFGTELTIELAKLNVSRNEAAKGFKDFHVVDE
HTEIDFGETVVSFFRTTHTIPDSVGINLKTKEGSIVYTGDFKFDQTAIPMYQTDYARLAE
IGKEGVLALLSESANAENPQPVASEAQIADEVFDTIKYWEGRIIVACVASNLQRVQQVLD
AAEKAQRKVVLTGQDFERIIRTAMRLEKLQLPSEDLLVTLKDMKNYDPEELIILETGRMG
EPIKSLQKMANGTHRNVKIEEGDLVYITTTPSIAMETIVAKTEDIIYRAGGTVKLISENM
RVSGHANPNDLQLMINLMKPTYFVPVQGEYRELAAHADLAHAVGMPYKNIYITGRGDVLE
YKNKRMSVAGTTSAENVMIDGLGIGDIGNIVLRDRKILSEDGIFVAVVTISRREKKIISK
PQITSRGFVYVKASRDLMKESSNMIETIVEKHLESNDFEWSKLKQDIRDQLGRYLFEQTK
RRPVILPVIMEATQRRNKK
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaccattaaaattatcccattaggcggcgttcgcgaaaatggaaaaaacatgtat
gtcgcagaagtgggcgaggatattttcatattagattgtgggctaaaatatcctgaaaat
gagttgctgggaatcgacgtcgtaatcccagattttacgtatttagaagaaaacattgat
cgtgtagctggtgtctttttaacacacgggcacgcagatgcgatcggggcgcttccttac
ttgttgtcgaaaatttctgtaccagtatttggaacggagttgacgatcgagttagcaaaa
ttgaatgtcagtcgtaacgaagcagccaaaggatttaaggatttccatgtggtagatgag
catacagaaatcgactttggtgaaacagtagtgagctttttccgtaccactcacacgata
ccagattcagtggggatcaatctgaaaacaaaagaaggtagtatcgtttatacgggagat
tttaaatttgatcaaacggctatcccgatgtatcaaacagattatgcacgattggcagaa
atcggcaaagaaggagtcttagctttactgagtgaatcggcaaatgcagagaatcctcaa
cctgtagcttctgaagctcagatagctgatgaagtatttgatacgatcaaatattgggaa
ggacgcatcatcgtcgcctgtgtagcaagtaatttgcaacgagtgcaacaagtattggac
gcagcagaaaaagcacaacgaaaagttgtcttgactggtcaagatttcgaacgaattatt
cgaacagcgatgcgtttagaaaaacttcaattaccaagtgaagatttgcttgttacattg
aaagacatgaaaaactatgatccagaagaactaatcattttagaaactggccgaatgggt
gaacccatcaagtctctgcaaaaaatggcaaacggcacacaccgtaatgtcaagatcgaa
gaaggggatttggtttatatcactactacgccaagcatcgcgatggaaacaatcgtggcg
aaaacggaagatatcatttatcgagctggtggaacagtgaaattgatttctgagaatatg
cgtgtttctggtcatgccaatcctaatgatttgcaattgatgatcaatttgatgaagccg
acatattttgtgccagttcaaggggaatatcgggaattagctgctcacgcagatttggct
catgcagtagggatgccttacaaaaatatctatattactggacgcggagatgtgctggaa
tataagaataaacgtatgagtgttgcaggaactacaagtgcagaaaatgtaatgattgat
ggtttaggcataggcgatatcggaaacattgttttacgtgatcggaaaatcttatcagaa
gatgggattttcgtagcggttgtcactattagccgaagagagaagaaaatcatctcaaaa
cctcaaatcacttcacgaggattcgtttacgtaaaagctagccgtgatctgatgaaagaa
agtagcaacatgatcgaaacgatcgtcgagaaacatttagaaagcaatgattttgagtgg
agcaaattaaagcaagatattcgtgatcaattaggtcgttacttatttgaacaaacaaaa
cgacgtcctgtgatcttgccagtcatcatggaagctactcaacgccgaaataagaaataa
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