Candidatus Electrothrix laxa: KKHLCK_01020
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Entry
KKHLCK_01020 CDS
T10500
Name
(GenBank) Integration host factor subunit alpha
KO
K04764
integration host factor subunit alpha
Organism
elax Candidatus Electrothrix laxa
Brite
KEGG Orthology (KO) [BR:
elax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
elax03032
]
KKHLCK_01020
03036 Chromosome and associated proteins [BR:
elax03036
]
KKHLCK_01020
03400 DNA repair and recombination proteins [BR:
elax03400
]
KKHLCK_01020
DNA replication proteins [BR:
elax03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KKHLCK_01020
Chromosome and associated proteins [BR:
elax03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
KKHLCK_01020
DNA repair and recombination proteins [BR:
elax03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
KKHLCK_01020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
CAK8712001
LinkDB
All DBs
Position
1:242139..242459
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AA seq
106 aa
AA seq
DB search
MKKETTSKSNGSKGNVTRKELAVAINKELDMSQRNSAELVDTIFASMKETLVSGESLKLV
QFGTLTVRDKSPRRGRNPRTGESMMITKRKMVSFRPSKRLRELLNQ
NT seq
321 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagaaacaacgagtaaatctaatggaagcaagggcaacgtcacccggaaagag
ctggctgttgcgattaataaagaacttgatatgtctcagcgtaattctgcagagcttgtt
gataccatctttgcttccatgaaggaaaccttagtaagcggagagtcgctgaagctggtt
cagtttggcaccttgaccgtgcgggataaatctccccgtcgcgggcgtaatccccggact
ggtgagtccatgatgatcaccaagcggaagatggtttctttccgtccttccaaacggctg
cgtgagttgctgaatcagtag
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