Candidatus Electrothrix laxa: KKHLCK_09270
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Entry
KKHLCK_09270 CDS
T10500
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
elax Candidatus Electrothrix laxa
Pathway
elax03018
RNA degradation
Brite
Enzymes [BR:
elax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KKHLCK_09270
Messenger RNA biogenesis [BR:
elax03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KKHLCK_09270
Ribosome biogenesis [BR:
elax03009
]
Prokaryotic type
rRNA helicases
KKHLCK_09270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Motif
Other DBs
NCBI-ProteinID:
CAK8720085
LinkDB
All DBs
Position
1:2197873..2199585
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AA seq
570 aa
AA seq
DB search
MTTFTDLGLNDELLQALDALGFKEPTPVQVKVIPLMLEQEIDIVSLAQTGTGKTAAFGLP
LIHLIDSKDKRTQGLILCPTRELCMQVSRDLESFSRFTPGIKVLAIYGGASIEQQMRELR
KGVQIIVATPGRLRDLIRRGKVDISGVRYAVFDEADEMLQMGFQDELNAILAETPKEKNT
LLFSATMSREVANIASRYMTNPVEITMGKKNAGAETVTHEYYLINGRDRYHALKRIVDNN
PDNFSIIFCRTRRDTQEVADKLIQDGYRADSLHGELSQAQRDLVMDKFRKKHLQLLVATD
VAARGLDVNDLTHVINYSLPDDIAGYTHRSGRTGRAGSNGTSIALVDMRERHRIRHIEQK
INKKFKKAQIPTGKEICTKQLHSLMEVISNTEVDHEQIDPLYADIEQQLAHLDREQLIKK
FISLEFNRFLKYYKNAPDLNQQVSGKDRPSSFQKNARSSQTNNAFTRVHLNVGRRNGILP
ENLISTINAAPGGGRIKVGKIEIMRNTATIEGDSRFISQILGAFQHFKVDGKAVTAKVLQ
PPAGGGGGGRRNSSSIGKSRKPWKGKRARG
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgaccacatttacagacctcggcctgaatgatgaactccttcaggctcttgacgccctg
ggatttaaagaaccaaccccggtgcaggtcaaggttatcccgcttatgctggagcaggag
atcgatatcgtcagcctggcccaaaccggaaccggaaagaccgcagcctttggcttgccg
ttgatccatctgatcgactcaaaggataaacgaacccaaggcctgatcctctgcccaact
agggaactctgcatgcaggtgtcgagagatcttgaaagcttttctcgtttcactccagga
atcaaagtattggcgatctatggcggagcgagcattgaacagcagatgcgcgagctccgg
aaaggtgtgcagattatcgttgccacaccgggacgcctgcgcgacctgattcgacggggc
aaggtcgatatctccggtgtccgatatgcagtttttgatgaggccgatgaaatgctgcaa
atgggttttcaggatgaactcaacgctatcctggccgaaaccccaaaagaaaaaaacacc
ctgttgttctcagccaccatgtccagggaggttgccaatatcgcgagccgatatatgacc
aatcctgtggaaatcaccatggggaaaaagaatgccggtgctgaaactgtcacccatgag
tattacctgatcaacggcagagatcgctaccacgccttaaaacggatcgtggacaataac
ccggacaatttctccattattttctgccgcaccagaagagatacccaggaagtggcggac
aagctgattcaagacggctaccgggccgattccctgcacggagaattgagccaggcccag
cgggatctggttatggataaattccgtaaaaaacacctgcaattgctggtggccactgat
gtcgcggcccgtggcctggatgtcaacgacctgacccatgttatcaactacagcctgcct
gatgatattgctggctatacccatcgcagcgggcgtaccggacgagccggaagcaacggt
acctccatcgctctggttgacatgcgggaacgccatcggatcagacatattgagcaaaag
atcaataaaaagttcaaaaaggcccagatccctacgggtaaagagatctgcaccaagcag
ctgcacagcctgatggaggttatcagcaataccgaggtggatcatgagcagattgacccg
ctgtatgcggatattgagcagcaacttgcgcatttggatcgagagcagctgatcaagaaa
tttatctccctggagttcaatcgattcctgaaatattataaaaatgcccctgatcttaac
caacaggtcagcggcaaagatcgaccaagcagttttcaaaaaaatgcaagaagctcgcaa
acaaataatgcctttactcgcgttcatctcaatgtcggacggcgcaacggtattttgccg
gagaacctgatcagcacgatcaatgccgctccgggcggtggtcgcatcaaggtcggcaag
atagaaattatgcgcaatactgcaaccattgagggagacagccgtttcatctcccagata
ctgggtgcctttcaacatttcaaggtcgacggtaaagccgtgactgcaaaggttctccaa
ccacctgctggcggcggtggaggaggacgacgaaacagtagcagtataggaaaatcacgc
aaaccttggaaaggcaagagagcaagaggatag
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