Candidatus Electrothrix laxa: KKHLCK_09465
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Entry
KKHLCK_09465 CDS
T10500
Name
(GenBank) RNA polymerase sigma factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
elax Candidatus Electrothrix laxa
Brite
KEGG Orthology (KO) [BR:
elax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
elax03021
]
KKHLCK_09465
Transcription machinery [BR:
elax03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KKHLCK_09465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
HTH_11
Fe_dep_repress
LysM3_LYK4_5
TrmB
HTH_7
Motif
Other DBs
NCBI-ProteinID:
CAK8720282
LinkDB
All DBs
Position
1:complement(2245661..2246623)
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AA seq
320 aa
AA seq
DB search
MSEEKKVSQQYHPLVVTSTDENLPAVSNPALHRYLQEISQYELLSREETDELAVRFKETG
DPDAAYRLVSSNLRLVVKVAMDFQKYWMQNFMDLIQEGNVGLVQATKKFDPYRGVKFSYY
AAYWIRAYILKFIMDNWRLVKIGTTQAQRKLFFSLNKEKKLLEAQGFKPDVKLLAERLNV
KESEVVEMGQRMDGWDVSLEAPVRNDSEDDQKSFLPSHGPGIEDIVAGHEVRDRISGVLA
RLDGDLNEKEKIILTERLLNDEPETLQTIADRFGISRERVRQIEANLLKKLKGIFEKELP
DVKDFISSERIVPATGSDRA
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaggaaaagaaggtcagtcaacaatatcatcctttagtggtgacgtccactgat
gagaacttgccagcggtcagtaatcctgccctccatcgctaccttcaggagatcagtcag
tatgaactcctgagtcgcgaagagaccgatgaactggcggttcgtttcaaggaaaccggc
gatcccgatgctgcctaccgattggtttcgtccaacctgcgcctagtagtcaaggtggcg
atggattttcagaaatactggatgcagaattttatggatctgattcaggaagggaatgtc
ggcctggtgcaggcaaccaagaagtttgatccctatcgaggggtgaaattttcttattac
gccgcctactggatccgtgcttatatccttaaattcataatggataactggcgactggtt
aagatcggcacaacccaggcccagcgcaaacttttctttagtctgaataaagagaagaaa
ttgttggaagcccagggctttaagcctgatgttaagctactggccgaacgcctgaacgtc
aaagaaagcgaagtcgttgagatgggtcaacgcatggatggctgggatgtttcgctagaa
gccccggtgcgtaatgattcggaagatgatcagaaaagctttcttcccagtcacgggcct
gggatagaggatatcgtagctggtcatgaagtccgggatcgtatatccggtgtgttagcc
cggctggacggagacctgaacgaaaaagaaaaaattattctgacagagcgcctgctgaat
gatgagcccgagaccctacagaccattgctgacaggttcggtatctcacgggaacgagtc
agacagattgaagcaaacctgctcaaaaaactgaaagggatatttgagaaggaattgcct
gatgtaaaagattttatcagttctgaacgaatcgtgcccgcaaccggttccgacagggcg
taa
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