Elizabethkingia miricola: VO54_00115
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Entry
VO54_00115 CDS
T03757
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
elb
Elizabethkingia miricola
Pathway
elb00540
Lipopolysaccharide biosynthesis
elb01100
Metabolic pathways
elb01250
Biosynthesis of nucleotide sugars
Module
elb_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
elb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
VO54_00115 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
elb01005
]
VO54_00115 (kdsA)
Enzymes [BR:
elb01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
VO54_00115 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
elb01005
]
Lipid A
VO54_00115 (kdsA)
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
NeuB
tRNA-synt_2c
Motif
Other DBs
NCBI-ProteinID:
AJW61609
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Position
127869..128678
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AA seq
269 aa
AA seq
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MIQALDKIKHKDSKNFFLIAGPCAIESEDLAMEVAEKVVQLTNQFNIPYIFKGSFKKANR
SRVDSFTGIGDIKALEILKKVGEKYDIPTTTDIHENEHAALAAQYVDVLQIPAFLVRQTD
LLIAAAVTGKAVTLKKGQFLSAESMKFAVDKVKDSGNDKIALIERGNSFGYTDLVVDFRG
IPTMRQYAPTILDITHSLQQPNQSSGVTGGRPELIETIAKAGIAVGADGIFIETHPNPAV
AKSDGANMLKLDYLEALLEKLTRVREAIL
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgattcaggcattagataagatcaaacataaagattctaagaacttctttcttattgca
ggaccttgtgctatcgaaagcgaagatctggctatggaagtagcggaaaaagtagttcag
cttaccaatcagttcaatattccatatattttcaaaggttcttttaaaaaagccaaccgt
tcacgtgttgacagttttaccggaataggagatattaaagcacttgaaatcctgaaaaaa
gtaggagagaagtatgatattcctacaacaactgatattcatgaaaatgaacatgcagca
ttagcagctcagtatgtagatgtattacagattcccgctttcttagtacgtcagacagat
ttattgatagcggctgccgtaacaggtaaagctgtaacactgaagaaaggacaattcctt
tctgcagaatctatgaagtttgctgtagacaaagtaaaagattcaggaaatgataaaata
gcactgattgaaagaggaaactcttttggttataccgatttggttgtagatttccgtggg
attcctacaatgcgtcagtatgcacctacaatattagatattacccactcgttacagcag
cctaaccaaagttcaggtgttacaggtggaagaccagagttaattgaaactattgctaaa
gctggtattgcagttggtgcagacggtatctttatcgaaacccatcctaatcctgctgtg
gcaaaatcggatggtgcgaacatgctgaaattagattatctggaagcattactggaaaaa
ctaacaagagtacgtgaagcaattttgtaa
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