Elizabethkingia miricola: VO54_00305
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Entry
VO54_00305 CDS
T03757
Symbol
priA
Name
(GenBank) Primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
elb
Elizabethkingia miricola
Pathway
elb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
elb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VO54_00305 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
elb03400
]
VO54_00305 (priA)
Enzymes [BR:
elb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VO54_00305 (priA)
DNA repair and recombination proteins [BR:
elb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VO54_00305 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Zn_ribbon_PriA
Helicase_C
Cas3-like_C_2
AAA_19
IstB_IS21
AAA_30
DUF4885
PhoH
NPHP3_N
Tudor_5
Connexin50
TsaE
NB-ARC
SLFN-g3_helicase
AAA_16
nSTAND3
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
AJW61794
LinkDB
All DBs
Position
342962..345400
Genome browser
AA seq
812 aa
AA seq
DB search
MFAQLILPLNIKGTYTYKVPVFLYGKLAIGMRVVVPFGGKKLYTGIVAEIHDREPEAFLP
KEIISALDNEAILPEEQLKFWQWVSDYYLCNVGEVYRFAFPSSLKLESETYVKRNPDVEV
DYEVLDVHEIHLMQALEVKSVINLQELEAFIPRKEVMKTLNSLIDERLIVIDEKISEKYK
AKEVSYIRLKEGLLESVALHEILSILNKAPKQKDLFLAILDKATSENPFVKKSELFEDKF
FSSQQLKALVDKGYVEEFYLQKDRIDSYDGDLEQIEQLTDLQQKALWKIVKQYEEKDVVL
LHGVTGSGKTHLYISKIEETVASGKNVLMLFPEVALTKQITQRLEKKYGQLLGFYHSKLT
DFEKVEIWRKVKNNQLKIVLGTRNALFLPFQNLGMVIVDEEHDSQYKTTTVQPFFNAKDA
AIVLGKFYEAKVLLGSATPSVESYYSALTNKIGLVKLDERFGESKVPKINLIDFKEAQNL
KTTNGSFTIQMIMEIREQLEQKKQVIILHNRRGYANVIECESCGYTQCCSNCDVVMTYHK
VSNELKCHYCGQRSAVPKQCPSCHSENLTTKGLGIQQLEEEVQRLFPEAEVGRMDLDAMR
TKFAYEKFFERVENQELDIIIGTQMISKGLDFDHVDLVVVPKSDAMLHIQDFRAEERAYQ
LFTQMAGRAGRTSQHGRMLLQTYNPYQTIFEKLSKDPDHIYEYFIQERNRFLYPPFVKLI
FIELKHRREDKVERASQFLGSVLRKYLPEECILGPEKSQIFRINNLYQYQILLKLPKGKK
YNLFKQFVSTSIDEFNEISGYKSVKLNLYVDF
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgtttgctcagctcattttgccattaaatattaaaggaacttatacctataaagttcct
gtttttttatatggtaaactggcgatcggaatgcgtgttgtagttccttttggcggaaaa
aaactttatacggggattgttgctgaaattcatgacagagaaccggaagcatttttacca
aaagaaattatttccgctttggataatgaagctatcctgccggaggagcaactgaaattc
tggcaatgggtttcggattactatttgtgtaatgtaggtgaagtataccgttttgcattt
ccttcctctttaaaactggaaagcgaaacttatgtaaagaggaacccggatgtagaagtt
gactatgaagtactggatgttcacgagatacatctgatgcaggcattggaggtaaagtcc
gtgattaatctgcaggaacttgaagcatttattcccagaaaagaggtcatgaagacgctt
aacagtctgatcgacgagcgtctgattgttattgatgagaaaattagcgaaaagtataaa
gctaaagaggtttcttatatcagattgaaagaaggattgctggaaagtgtagcgcttcac
gaaatcctttcgatactgaataaagcgcctaaacaaaaagatctttttctggccattctg
gataaagcaacctccgaaaatccgtttgtaaaaaaatcagaactctttgaagataaattt
ttcagcagccagcagctaaaagcacttgttgataaaggctatgtggaagagttttatttg
caaaaagatcgtatagactcgtatgacggggatttggaacaaatagaacagcttacagat
cttcagcaaaaagctttgtggaaaattgtaaagcagtacgaagagaaagacgttgtattg
ctgcatggtgttacgggatctggtaaaacccacctgtatatttccaaaatagaagaaaca
gtagcttccggaaagaatgtattaatgcttttcccagaagtagcattgaccaagcagatc
acccaaagattagagaaaaaatacggacaattactcggtttttaccattccaaattaacc
gactttgaaaaggttgaaatttggagaaaggtgaaaaataaccagttgaaaattgttctg
ggaactcggaatgctctctttttaccatttcagaatcttgggatggtaattgtagatgaa
gaacacgattcccaatataaaacaacaactgttcagcctttttttaatgcaaaagatgcg
gcaattgttttaggaaagttttacgaagcaaaagttctgctgggcagtgcaacaccttct
gtcgaatcttattattcggccttaaccaataaaattggattggtgaaattagatgaacgt
tttggcgaaagcaaagttcctaagataaacctgatcgattttaaagaagctcagaatctg
aaaactaccaatggcagctttacaatccaaatgattatggagatcagggagcaattggag
cagaagaagcaggttatcatccttcacaatcgccgtggatatgccaatgtgatagaatgt
gaaagttgtggttatacacaatgttgtagtaattgcgatgttgtgatgacttatcataaa
gtatctaacgaactgaagtgtcattattgtggtcagagatcggcagtgcctaagcaatgt
ccgtcttgtcattccgaaaatcttacaacaaaaggtttaggaatccagcaattggaagaa
gaagttcagcgtctgtttcctgaagcagaagttggacgaatggatttggatgctatgcgg
actaaatttgcttacgagaagttctttgaaagagtagaaaatcaggaactggatattatt
attggtacccagatgatttctaaaggactggattttgatcatgtggatcttgttgttgtt
ccaaaatcagatgcaatgttgcatattcaggacttccgggcagaagaaagagcttatcaa
cttttcactcagatggcaggacgcgccggaagaacttcgcaacacggaagaatgctgcta
cagacttataatccttatcagaccatttttgagaaattgtcaaaggatccggaccacata
tacgaatactttattcaggaaagaaacagattcttatatccgccttttgtgaaattaatt
ttcatagaattaaaacaccgccgggaagataaagtagaaagagcatcccagtttctaggc
tctgtcctaagaaagtatttgccggaagaatgtatactgggaccagaaaaatcacagatt
ttcaggattaataatttataccagtatcagattttactaaaacttcctaaaggaaaaaaa
tacaatctgttcaaacaatttgtctctacttcaatagatgaattcaatgaaatttcgggt
tacaaaagtgtgaaattgaatctctatgtcgatttttaa
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