Elizabethkingia miricola: VO54_00477
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Entry
VO54_00477 CDS
T03757
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
elb
Elizabethkingia miricola
Brite
KEGG Orthology (KO) [BR:
elb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
elb03016
]
VO54_00477 (truB)
Enzymes [BR:
elb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
VO54_00477 (truB)
Transfer RNA biogenesis [BR:
elb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VO54_00477 (truB)
Prokaryotic type
VO54_00477 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AJW61966
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All DBs
Position
complement(527320..528027)
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AA seq
235 aa
AA seq
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MKFTVEDIQAGQILLVDKPLDWTSFNAVNKIKWKLKREFKLKKVKVGHAGTLDPRATGLL
VICTGKATKQIPQIQDASKEYWAEIKIGVQTESYDTEKPEILPQDISGITEANIHDALKK
FLGEIDQKPPIFSALKVDGKRAYDLARAGQEVDIKVRKITIHYIDRVEINLPYISFYVGC
SKGTYIRSLAHDIGQELGIGAYLTQLRRTKIGEYTIENSTTDYLENEYRFGDTEE
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttacagtagaagacatacaagcaggacagatattattagtagacaaaccattg
gactggacgtcctttaatgctgtaaataagataaaatggaagctaaaacgtgagtttaaa
cttaagaaggtaaaagtaggacatgccggaactcttgatccaagagcgaccggattattg
gttatatgtaccggaaaagcaacaaaacaaattccacaaatccaggatgcttctaaagaa
tattgggctgaaataaaaattggagtacaaacagaatcttacgataccgagaaaccggaa
attctgcctcaagacatttcgggaatcacagaagcaaatatccatgatgctttaaaaaaa
tttcttggtgaaatcgatcagaaaccaccaattttttcagctttgaaagttgatggcaaa
agagcctacgatcttgcccgtgcaggtcaggaagtagatataaaggtcagaaaaatcact
attcattatatagacagagtagagatcaatctgccttatatttctttctatgtcggatgt
tccaaaggtacttatatccgttctctggcacacgatatagggcaggagcttggtattggt
gcatatttaacacagctccgaagaaccaaaataggcgagtataccatagaaaattctact
accgattatttagaaaacgaatatagatttggagatactgaagagtaa
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