Elizabethkingia miricola: VO54_00532
Help
Entry
VO54_00532 CDS
T03757
Symbol
secD
Name
(GenBank) Protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
elb
Elizabethkingia miricola
Pathway
elb02024
Quorum sensing
elb03060
Protein export
elb03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
elb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
VO54_00532 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
VO54_00532 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VO54_00532 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
elb02044
]
VO54_00532 (secD)
Secretion system [BR:
elb02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
VO54_00532 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
DUF3165
Motif
Other DBs
NCBI-ProteinID:
AJW62021
LinkDB
All DBs
Position
complement(585891..588785)
Genome browser
AA seq
964 aa
AA seq
DB search
MQGKGLITTIAIILGLICINELLPSFYANRIEKEAQALSGGNEVKYKKELEKLSKDTLNL
GFTKLDYWSAKGKEMKLGLDLKGGINVLLEINQRDLVNDLTNYSTNPVLVEALNRTDAAQ
KFSTKTYIDNFFVQFDAVNKEKGTNVKLSNPEVFGTQKLSDLIKFNTPDDEVKKIISKKI
DASVGSAFEVIRTRIDKLGVTQPNVQRVPGTGRILVEMPGIKDIDRVKKLLQTSARLQFW
EVQTAGEVAPYFQQLTSVVMTKGDSIGINKNMNLINTLDMQNGARQNGVGNVKLSDTATV
NKLLNSAQAIKARPANLRFTKFMWAAKPESNAPDNLTLYAIRGTANNKAPLDGAVKDARV
NYDQIGRIEIGMQMDSDGTKVWKTLTEKNIGRPIAVTLDDNVYTAPNVNTAIPNGQSVIT
GNFSQDEAKDLVDVLNSGKLPATAKIVQADVVGPSLGAESINAGVMSFIIAFALIMVYII
FYYGMAGVYAVIAMIINLFYVFGIMDSIDATLTLPGIAGIVLSMAMAVDTNVIIYERTKE
ELFAGKGIREAYNDGFKHALSAIIDGHATTLLTAVVLYIFGTGPIQGFAVTLIIGILMTF
FTSVLLSRVMIFSRLGKGKEISVWTSFSKNLFRNIWIDFIGKRKWSYIFSTILMIICIAS
IVTKGFKFGVDFKGGRSYVVRFDKPVVASDIQEELAPLFKTQDGKNEAVDVKTFGNSNQL
RITTDYKIDDVNTTVDSEIEHKLYDGLKKHLPANETFDAFKSSDVGHAGIVSSTKVGPTV
ADDIQVHGTLAVLAALAGIFIYILLRFRKWQFSLGAVVALFHDAVVILGVFSLFYTVAPF
NMEINQDFIAAVLTVLGYSINDTVIVFDRIREYLRERKSISLAGLFDDSISSTLGRTFNT
SFTTILVILAIFIFGGDNMKGFMFALLIGIGFGTYSSIFIASAIAYDCLKGRKKDAPPVH
EINK
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggaaaaggactcattaccactattgcaatcatcctcggattgatatgcattaat
gaactcctgccgagtttctatgcgaatagaattgagaaagaggcacaagctctttccgga
ggcaatgaagttaagtacaaaaaggaattagaaaagttatccaaagacacacttaatcta
gggtttactaaactggattattggtctgccaagggaaaagaaatgaaacttggtctggat
ttgaaaggagggatcaacgttttgttggaaattaatcaaagagacctggttaatgattta
acgaattattccacaaaccctgttttagtagaagctctgaacagaacagatgctgcgcaa
aagttctctacaaagacatacatcgataacttttttgttcagtttgatgctgtaaacaaa
gaaaaaggaacaaatgtaaaactttctaatccagaagttttcggtactcagaaattaagt
gatttgattaaattcaacacacctgatgacgaagtaaaaaagattatttctaagaagatt
gatgcctctgtaggttcagctttcgaagtaatccgtacacgtatcgataagctaggggta
acacaaccaaacgtacagagagtacctggaacaggtcgtattttggttgaaatgcctggt
atcaaggatattgacagagtaaagaaattactacagacttcagcaagattacagttctgg
gaagtacagactgctggtgaagttgctccatatttccaacaacttacttctgttgtaatg
acaaaaggagattctattggtattaataagaatatgaatcttatcaatactctggatatg
cagaatggtgcaagacagaatggagtaggtaacgttaagctttcggatacagctactgta
aacaaattattaaacagtgcacaggctattaaagcacgtcctgctaaccttagatttact
aagtttatgtgggctgcaaaacctgaatctaatgctccggataatttgacattatatgca
atccgtggaacagcaaacaacaaagctccgcttgatggtgctgtaaaagatgcacgtgtt
aactacgaccaaatcggaagaattgagatcggaatgcagatggactctgatggtactaaa
gtatggaaaacacttactgagaaaaacatcggaagaccaatcgctgtaactctggatgat
aatgtatatactgctcctaatgtaaatacagctattcctaacggacaatctgtaattact
ggtaacttcagtcaggatgaagctaaagacttagtagatgtactaaactcaggtaagctt
cctgctactgcaaaaattgttcaggcagatgttgttggaccttcattaggtgctgaatct
atcaacgcaggtgttatgtcattcattattgcgtttgcccttatcatggtatatatcatt
ttctactatggtatggctggtgtttatgcagtaattgcgatgattattaacttattctac
gtgtttggtattatggactctatagatgctacacttaccttaccaggtatcgcaggtatc
gtattatccatggccatggcagtagatacgaacgtaatcatctacgagagaactaaagaa
gaattatttgcaggaaaaggaatccgtgaagcatacaatgatggtttcaagcacgcttta
tctgcgattattgacggacacgcaacaacattactaacagctgttgtattatatattttc
ggtacaggacctatccaaggatttgctgtaaccttaattattggtattctgatgacgttc
tttacttctgtactattgtcgagagtaatgattttcagcagacttggaaagggtaaagag
atttcagtatggacatctttctcaaaaaatcttttcagaaatatctggatcgactttatc
gggaaaagaaagtggtcttatatcttctctacaatattgatgatcatctgtatcgcatct
attgttacaaaaggcttcaaatttggggttgacttcaaaggaggaagaagttatgttgta
agatttgacaagccggttgtcgcttctgatattcaggaagagttggctccgttatttaaa
actcaagatggtaaaaacgaagctgtagatgttaaaacatttggtaactctaatcagctt
agaataacaactgactacaaaattgatgacgttaacacaactgttgactctgaaattgaa
cataaattatatgacggattaaagaaacaccttccggctaacgaaacattcgatgctttc
aaaagttctgatgttggacatgcaggaatcgtttcttctacgaaagtagggcctacagta
gcagatgacattcaggttcacggtacattagcagttcttgctgctttagcgggaatcttc
atctatatcttattaagatttagaaaatggcaattctctcttggtgctgttgtggcattg
ttccacgatgcggtagtaattttaggggtattctccttattctacacagtagcgccattc
aatatggagatcaaccaggatttcattgcagctgtattaacagtattaggatattccatt
aacgatacggtaattgtatttgaccgtatccgtgaataccttagagaaagaaaatctatc
agccttgcaggtctgtttgatgattccatcagcagcacgttaggtagaacattcaacact
tcattcactacgatcttggttatcctagcgatcttcatcttcggaggtgataatatgaag
ggcttcatgtttgcattattaatcggtattggtttcggtacttattcatccatcttcatc
gcatcagcaattgcttatgactgtttgaaaggacgaaaaaaagacgccccgccagtccat
gagataaacaaataa
DBGET
integrated database retrieval system
