Elizabethkingia miricola: VO54_00898
Help
Entry
VO54_00898 CDS
T03757
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
Organism
elb
Elizabethkingia miricola
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_34
Motif
Other DBs
NCBI-ProteinID:
AJW62384
LinkDB
All DBs
Position
973209..976544
Genome browser
AA seq
1111 aa
AA seq
DB search
MELPKEYILPDFNIRTLHIYDLLKHTANADFMAVKEFQDIYPVALELNAGVFTKNSSLSD
FPRVAISQVGANLVTSCSCNSAEDKLCIHQAEIIHCLLEEKDYRIFFDVYMRHKTLLPYA
KSYGLEEEGNLDIYFRLEYLNGRLQVSPKIKELLQVDEHILKRDLLPRRTSIIKELATQD
TSKKQILVIGKHRYYNQLNFQLMEADTTQTGKLKNPVNSIDVMKLLWKAELASEIKFYTA
ITSFNNQYGETDPAEAEALKHIVQNPLSLEVYLHDRAIAESISAKSLVPVNLNTLQAEIQ
LHVFRKEPFYEITGELLFRDTALPFSQVVIRNEYFVYYRNTYYLITDSDMLRVIQFFKSN
NEILLVHNSRYEVFMQSILTQLEQRVQINYSYIRQAAPTEIADKDYTTEKLIYLHQEGSY
ISITPVMKYGNVEIPVYSRKQLLDTDQNGNEFKIERDHNAEMQLTRVVMEQHPDFREQIE
EQEYFYLHKDKFLDDEWFLNAFEAWRNEDIHILGFNNIKNNKLNAHRAKITIEVTSGIDW
FNAQLKVGFGHKKATLKQVNKAIRNKSKFVQLDDGTLGILPEEWIHKIARYFQAGDIDEE
LLKIPKISYTEIQDLFEKEVLSSEVQAEVAAFTHNFSANTEIPEVAVPEALNAELRTYQR
EGLNWLSFLDSHNFGGCLADDMGLGKTVQIIAFILSQREKHGHTTSLVVLPTSLLFNWQE
ELAKFAPSVKVLTHYGADRQKSTADFQKYEVILTTYGMLLSDITFLKKFRFNYIFLDESQ
TIKNPNSERYKAARLLQSRNRITLTGTPVENNTFDLYGQLSFACPGLLGSKQYFKDIYAI
PIDKFEYSKRATELQKKIKPFVLRRTKKQVATELPEKTEMLIYCEMNTEQRRIYDLYEKE
VRDFISATDEDEIHNKSMHVLTGLTRLRQICNSPVLLKDGHSGDHAVKIEILTEQIENKS
KEHKILVFSQFVEMLDLIKAKLDEKNIRYEYLTGQTRNRGAKVQHFQNNEEVRVFLISLK
AGGTGLNLTEADYVYLVDPWWNPAVENQAIDRSYRIGQTKNVVAVRMICSGTIEEKMMNL
QKKKKKLAQDLITTETSFFSSLSKDDLLSIL
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atggaactgcctaaggaatacattttaccagactttaatataagaacactgcatatatac
gatctgctaaagcatacagccaatgcagattttatggctgtgaaggagtttcaggacatc
taccctgttgcattggagctaaatgccggcgtgtttacgaaaaactcttctttgtcagat
ttcccaagagtagccattagtcaggtcggtgccaatctggtaacgtcgtgctcctgtaat
tctgctgaagataagctgtgtatacatcaggccgagattattcactgcctgcttgaagaa
aaggactaccgtattttttttgatgtctatatgaggcacaaaaccctccttccctatgct
aaaagctatggattggaagaagagggcaatctggatatatatttccggctggagtacctt
aatggcagacttcaggtaagtcctaaaataaaagaattattgcaggtagacgaacatata
ctgaaaagagatttgctcccccgccgaacgtccataataaaagagctggccacacaggac
accagcaaaaagcagatactggttatcggtaaacaccgctattacaaccagctgaatttc
cagctgatggaagccgatacaacccaaaccggaaagcttaaaaatccggtaaatagtata
gatgtaatgaagctgctgtggaaagcagaactggcctcggagataaaattctataccgct
attacaagcttcaacaatcagtacggagaaaccgatcctgctgaagcagaagccctgaaa
catattgtgcaaaatccgctgagtctggaggtttatctccacgacagagctatagcagaa
agcatatcggcgaagtcattagttcctgtgaatctgaatacactgcaggctgaaattcag
ctccatgttttccggaaagagcctttttatgaaataaccggagagttactattcagagat
acagcgcttcctttcagtcaggtagtcatccgaaacgaatattttgtttactaccggaat
acctattatctgattacagattccgatatgctgcgggtgatacagttctttaaatccaac
aacgaaatattactcgtccacaactccagatacgaagtctttatgcagagtatactgact
cagctggagcaacgggtacagattaattacagctatatccgtcaggcagcgccaacggag
atcgccgataaagattacacaaccgaaaagcttatctacctgcaccaggaaggcagttat
atatccataacaccggtaatgaaatatggcaatgtggaaattccggtatactcccgcaag
caattgctggataccgaccagaacggaaatgaatttaaaattgaacgtgatcataatgct
gaaatgcagctaaccagagtggtgatggaacagcacccggattttagagaacaaatagaa
gaacaggaatatttttacctgcacaaagataagttcctggatgatgaatggtttttgaac
gcctttgaggcatggcgaaatgaagacatacacatactgggtttcaacaatatcaaaaat
aacaaactcaatgcacaccgtgctaaaattactatagaagttacaagtggaatcgactgg
ttcaatgcacagctgaaagtaggttttggacataaaaaagctactctaaagcaggtaaac
aaagctatccggaacaagagtaaatttgtacaactggatgacggcacccttggaatactc
ccggaagaatggatacataaaattgcccgttactttcaggccggtgatatcgacgaagag
ctcctgaagatcccgaagatcagctataccgaaatacaggatttatttgaaaaagaggtt
ctaagtagcgaagtacaggcagaagtcgctgcttttacacacaatttttctgcaaataca
gaaattcccgaagttgcagtacctgaagccttgaatgctgaactaagaacttaccagcgg
gaaggactgaactggctaagctttttggacagtcataatttcggaggctgccttgcagac
gatatggggctgggtaagacggtacagattattgcattcatcctctcacaaagagaaaaa
catggccatacaaccagccttgttgtattaccaacttcgctgctcttcaactggcaggag
gaactggctaaatttgcaccttctgtaaaagtgctaacccattatggtgcagacagacaa
aaaagtacagcagattttcaaaaatatgaagttatactaaccacttatggcatgctgctt
tcggatattacgttcctgaagaaattcaggttcaactatatatttctggacgaatcacaa
accattaaaaatccaaactcggaaaggtataaagcagcacgcctgctgcaatcgcgtaac
agaattacactaaccggaacccctgtggaaaataatacttttgatttgtacggacagcta
tcttttgcctgtcccggactattgggaagcaaacaatacttcaaagatatatatgccatc
cctatcgacaagtttgaatacagcaaacgggctacagagcttcaaaagaaaataaaacct
tttgtcctgagaaggacaaaaaagcaggttgctacagaattaccggaaaaaacagagatg
ctgatctattgtgaaatgaatacggagcagcgcaggatttacgacctctatgaaaaagaa
gttcgggattttatatcagctactgatgaagatgaaatccataataaaagcatgcatgta
ttaaccggacttacgagacttagacagatatgcaactcccctgttttgctaaaagatggt
cattccggagatcatgccgtaaagattgaaattctgacggagcagatagaaaacaaatcc
aaagaacacaaaatactggtattctcacaatttgtcgaaatgctggatctgattaaagct
aagctggatgaaaaaaacatccgctatgaataccttaccggacaaacccggaatcgtggt
gctaaagtacagcactttcagaataatgaagaagtacgggtcttcctgatcagcctgaaa
gctggtggtacgggtttgaatcttaccgaagccgactatgtatatcttgtagatccgtgg
tggaatcctgcagtagaaaatcaggctatagaccgtagctaccgcattggtcaaaccaaa
aatgtagtggccgtacgaatgatatgttctggtaccattgaagaaaaaatgatgaacctg
cagaagaaaaagaaaaaactggctcaggatcttattaccaccgagacttcattcttcagc
agtctttctaaagacgatctgctgagtattttataa
DBGET
integrated database retrieval system
