Elizabethkingia miricola: VO54_01245
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Entry
VO54_01245 CDS
T03757
Symbol
hup
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
elb
Elizabethkingia miricola
Brite
KEGG Orthology (KO) [BR:
elb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
elb03032
]
VO54_01245 (hup)
03036 Chromosome and associated proteins [BR:
elb03036
]
VO54_01245 (hup)
03400 DNA repair and recombination proteins [BR:
elb03400
]
VO54_01245 (hup)
DNA replication proteins [BR:
elb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
VO54_01245 (hup)
Chromosome and associated proteins [BR:
elb03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
VO54_01245 (hup)
DNA repair and recombination proteins [BR:
elb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
VO54_01245 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HU-CCDC81_bac_1
COMMD9_HN
DUF4777
Motif
Other DBs
NCBI-ProteinID:
AJW62727
UniProt:
A0AAQ1PG16
LinkDB
All DBs
Position
1336786..1337082
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AA seq
98 aa
AA seq
DB search
MTKAELVNTISNKLGVEKNDTQKVIEAFMQEIKTSLYNNDNVYLRGFGSFVIKTRAAKTG
RNISKNTAIEIPAHNIPSFKPSKMFAEKVKTKVKVENK
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagctgaattggtgaacaccatctccaataaactaggggtagaaaagaatgat
acgcagaaagttattgaagcgtttatgcaggaaatcaaaacttctctttataacaacgat
aacgtttatttaagaggttttggatcttttgttattaaaacccgtgctgcaaagactggt
agaaacatttcaaagaatacagctatcgaaatcccggcacacaacattccttctttcaaa
ccttcaaaaatgtttgctgagaaagtaaaaaccaaagtgaaagtagaaaataaataa
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