Elizabethkingia miricola: VO54_01688
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Entry
VO54_01688 CDS
T03757
Symbol
gabR_1
Name
(GenBank) HTH-type transcriptional regulatory protein GabR
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
elb
Elizabethkingia miricola
Brite
KEGG Orthology (KO) [BR:
elb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
elb03000
]
VO54_01688 (gabR_1)
Transcription factors [BR:
elb03000
]
Prokaryotic type
Helix-turn-helix
GntR family
VO54_01688 (gabR_1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
Aminotran_5
TNF
GyrB_insert
Motif
Other DBs
NCBI-ProteinID:
AJW63164
LinkDB
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Position
1828975..1830465
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AA seq
496 aa
AA seq
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MSSPDQFLYKKIIYIDNKSSRPVYLQIVHQMINAIQRGYLMKGMKLLGTRSMSDILQVHR
KTVIAAYEELDAQGWVETIPNKGTFVIESGSSKSINIKNLQRQDLATYPQQTGFSFRQSN
LLDNPFEHSSCTYIFNDGVPDTRLSQIGNYSSFYSANLKRKSSYRKIGYYNTEGSEYFKE
HLSQYLNLSRGLHISKNNLLITRSTEMSIYIISEILLSEGDMVVVGDPSYFAVNMIFQKS
GAVIKTIPVDEEGIRTDLIEELCKKTKIRMLYLTPHHHYPTTVPLSAQRRIELLSLASQY
GFAIVEDDYDFEFHYDNSAILPMASSDTDGMVIYVGSFGKSLAPGFRTGFIVAPENLMTE
MRKYLGIIDRQGDIIMEQALGEMIAEGEINRHLKKSAKIYKERRDLFTNLLQEHLGDQIK
FSIPSGGLAVWLEWQSPVNLFQLSAYCQQHDLFIPRTLLYQNKDYTALRLGYGHLEEDEM
NKSLQILHDANESLKK
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtccggatcagtttttatacaagaaaataatctatatcgataacaaatcatca
cgacctgtatatctgcagatcgttcatcagatgattaatgctattcagcggggatacctg
atgaaaggcatgaaattattgggaaccagaagcatgagtgatattctgcaggttcaccgt
aaaactgttattgcagcttatgaagaactggatgcccaaggatgggtagaaacaattccg
aataaaggaacatttgtcattgagagtggaagttccaaaagcataaatatcaaaaacctg
caaagacaggatctggcaacttatccacaacaaacaggtttcagttttaggcaaagcaat
cttctggacaacccgtttgagcattcatcctgtacttatatctttaacgatggcgtacca
gatacacgcttgtctcaaatcggaaattattccagcttttacagtgcgaatctgaaacgt
aaaagcagttacagaaaaataggctattataatactgaaggcagtgaatactttaaagaa
catctgtcccaatatcttaatcttagccggggattgcacatcagtaaaaataaccttctg
attaccagaagtacggaaatgagtatttatattatttccgaaatacttttgtctgaagga
gatatggtagtcgtaggtgatcccagttattttgccgtaaatatgatttttcagaaatct
ggtgcagtcatcaaaactattccagtagatgaagaaggtattcgcactgatcttatagaa
gagctttgcaaaaagaccaaaataaggatgctttaccttacacctcatcaccactacccg
actacagtgcctcttagtgcccagcggcgtattgaattactatctctggcctctcagtat
ggtttcgctattgtagaagatgactatgatttcgaatttcactatgacaattctgcgata
ttaccaatggctagttctgacaccgatggtatggttatctatgtaggctcatttggtaaa
tctctggctccgggcttccgtaccggttttattgtagcacctgaaaacctgatgacagaa
atgcgtaaatacctgggcattatagacagacagggagatattataatggaacaggctttg
ggtgagatgattgctgaaggcgagattaaccgccatctgaaaaaatctgcgaaaatatat
aaagaacgcagagatctgttcacgaacttacttcaggaacatctgggagaccagataaaa
ttcagtattccttccggtggattggctgtatggctggaatggcaatctcctgttaatctt
tttcagctgagtgcctattgtcagcagcacgatctctttattccacgtaccttattatac
cagaacaaagattatacagctctccgactgggttatgggcatttggaagaagatgaaatg
aataagtctttacaaattcttcatgatgcaaatgagtctctgaagaaataa
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