Elizabethkingia miricola: VO54_01960
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Entry
VO54_01960 CDS
T03757
Symbol
lgrD
Name
(GenBank) Linear gramicidin synthase subunit D
Organism
elb
Elizabethkingia miricola
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
PP-binding
Hexapep
Hexapep_GlmU
Motif
Other DBs
NCBI-ProteinID:
AJW63433
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All DBs
Position
2116068..2119988
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AA seq
1306 aa
AA seq
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MNKSFILGKIAPEFIKNETLPELLIPTFEKYKTKPAFIFKDRTLTYEELDNWSNAIALRL
KEEGVQEGDCVGVWYPRSLELPVAILGILKAGACYIPLDREMPEDRIKMVFTDINVKTYF
SDTDAGIHCSPITIPEQPTEKVSLPEVAINPDNWAYVLFTSGSTGNPKGIPISHRNICHL
IRSEEDFIGIKDTDKVYQGFSVSFDMWCEEVWISLFAGATIWIADATTVKAIDELSTVLI
ENKITVLHAVPSILAIIDEVPALRLVNAGGEACTKQVQEKWAKPYRTFINSYGPTETTVS
SNMAILNATQELTIGPPLPNYHIAVVDENMNIVPHGERGEMIISGPGVSKGYFNLPELTA
QKFLPNPFPELPGDTIYKTGDAVAFREDGFIDFQGRIDDQIKLRGYRIELGEIETRLNQL
EGVSSAAVTVREDANQQGQLVGYAVMKSDADFNENEMRKELAKFLAPYMVPITIIKMKEM
PRMPSGKIDRKKLPLPDSFLVQESTSHIEIGENDSVDEKLIKVLHIVFPGKDINLSQDFF
TDLGGHSLLAATLVSHLRQKAGIPYASLKDVYENRPLSAFTEVLQKKQDTKAERKEPFQK
VPTLQYYLCNLAQTLSLLVIYGLLSIQIFFPYLAYYYFQLNGFGLHYALLSAMLLYTLIP
PVYSLIILITKWLVIGRIKEGDYPLWGWYYFRWWLWKTVKRLMPSEFIVETPLYPKYLRL
LGVKVHPSAQLSLLPIAAEDLVTIDENVTTSSGCCIDNASVENGILKIRRVHLKAHSYIG
SSVVVCGETTIEEFGELQDLSCLNEGEKVGYGEVWNGSPAQKTRTKTTEETQQPKLTSAG
KRSLFSLFYAISLFFFPLIIVLPLAPTLYTLYYLDERSSDYNFYYLWQAPILSTVYILLF
ILVVSLLTRLLQIKMKPGVYPVYSFTYYRKWVKDQIFNISLVVLHPLFASIYISKFYRMM
GAKVGKNSEISTASDVSHNLLEIGEGSFIADAVILGEHDVRNEHLILAKTKIGNNSFVGN
SGLIPQGYQLGDNMLIGVLSKTPTEEQLANSAEKDWFGSPPIGLPSRQKSDIFNDHLTYN
PPASLKFSRAIVEGIRIILPQTIIIICSVLFIAYTSIYLEGRIPLLLALSPFYYLGIVAL
PAFFFTVLLKWIFVRKYKKTEIPMYSLRVWLSEGITTLYEALAIPFFLDALRGTMWLPIF
MRFLGVKIGKRVWLNTTDITEFDMVSIGDESMLNEECGPQTHLFEDRIMKIGSVKIGKQT
TISSRSIILYDTEIGNNVHVDALSLVMKGEILSDNTSWHGSPVRGK
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaagctttattttaggcaaaatagcacctgaatttattaaaaacgaaacttta
ccggagctattaattcccacttttgaaaaatataaaaccaaacctgcttttatttttaaa
gacaggactcttacttatgaagaattggacaactggagtaatgctatagccttgcggcta
aaagaagaaggcgtacaggaaggggactgcgtaggcgtatggtatcccaggagtcttgaa
cttccggttgccatcttaggaatactaaaagcaggagcatgctacatccctctggataga
gaaatgcctgaagaccgtatcaaaatggtatttacagatatcaatgtgaaaacttatttt
tctgatacagatgctggcatccattgcagccccattactattccggagcaaccaacagaa
aaagtttcacttccggaagttgcaattaatccggataattgggcatatgtgcttttcacc
tccgggagtaccggaaatccgaaaggcataccgatttcccaccgaaatatatgccacctg
atccgttccgaagaagattttattggcattaaagataccgacaaagtctatcagggcttt
tctgtatcgttcgacatgtggtgcgaagaagtgtggataagtctttttgcaggagccaca
atatggatagcagatgctacgactgttaaagcgattgacgaactcagcactgttttaata
gaaaataaaattactgttcttcatgctgttccaagtattttagccattatagatgaagtt
ccggctttacgacttgtaaatgcaggcggtgaagcttgtaccaaacaggttcaggaaaaa
tgggcaaaaccataccgcacatttatcaacagctacggaccaacagaaactaccgtttct
tctaatatggcaatactaaatgccactcaggaacttacgattggtcctccattgcccaac
tatcatattgccgtcgtggacgaaaacatgaatattgtaccgcatggtgaacgtggtgaa
atgattatttccggcccgggtgtaagcaaaggatattttaatttgccagaacttacggca
caaaaattcctgcccaaccctttccctgaattaccaggggatacaatatataaaactggc
gatgctgttgctttcagagaagatggcttcattgattttcagggaagaatcgacgatcag
attaagctacggggctatcgtattgaactaggtgaaatagaaacccgcctaaaccaactg
gaaggtgtttcctctgcagctgttacggtaagagaagatgcaaaccagcaggggcagctg
gttggttatgctgtaatgaaatctgatgcagattttaatgaaaacgaaatgcgcaaagag
ctggcaaaatttctggctccttacatggttccgatcaccattataaaaatgaaagaaatg
ccacgaatgccaagtggcaaaatagacagaaaaaaactacccttacccgatagcttctta
gtacaggaaagtacaagccatatcgaaattggggaaaatgattctgtagatgaaaaactt
ataaaagttctccacattgtatttcctggaaaagatattaacctgtctcaggatttcttc
actgaccttggcggacactccctactggcagccactcttgtttcacatttaagacagaaa
gccggaataccttatgcctctcttaaagatgtatatgagaaccgcccactttcagcattt
acagaagttctgcagaaaaaacaagatacaaaagcggaacgtaaagaacctttccaaaag
gtgcctactttacaatactatctatgcaatttagcacagacactaagtttactggttata
tatggcctattaagtattcagatattttttccatatctcgcttactattatttccagcta
aacggtttcggtttgcactacgctttactaagtgctatgctattgtacactcttattcct
ccggtctattctttaatcatcctcattacaaaatggctggttatcggacgaataaaagaa
ggagattatccactatggggatggtattacttcagatggtggctgtggaaaactgtaaaa
agattaatgccatctgagtttattgtagaaactcctctttatcccaaatatttgcgctta
ttaggtgtaaaagtacatccgtccgctcagttaagcttattaccaattgcggccgaagat
cttgtaaccatagatgaaaatgtaacaaccagttccggatgctgcatagacaatgcttct
gtggaaaacggaatattaaaaatacgcagagtacacctaaaggcacattcctatataggt
tcttctgttgtagtatgtggcgaaactactatagaggaatttggagagttacaggatctg
agttgtctgaatgaaggtgagaaagtaggttacggagaagtatggaacggaagcccggcc
caaaaaaccagaacaaaaacaacagaagaaacacaacaacctaaattaacttccgccgga
aagagaagtttattctctttgttctatgctatatcactgtttttcttcccgttgattatc
gtattaccgctagctcctaccctttatacattatactatctggatgaacgttcatcggat
tacaatttctattatttgtggcaggcaccaatactttctaccgtttacattttgttgttt
attctggttgtaagtttattgaccagactactacaaatcaaaatgaaacccggtgtatat
ccggtatacagttttacctactacagaaaatgggtaaaagatcagatattcaacatatct
ctggtggtattacatcctttatttgcttccatctatatttctaaattttacagaatgatg
ggagccaaagtagggaaaaactcagaaatttctactgcaagtgatgtatcacacaactta
ctggaaattggtgaaggttcttttattgccgatgctgtgattctgggagaacatgacgta
agaaatgagcacttaatattggctaaaacaaaaattggcaacaatagttttgtaggtaat
agtggactgataccacaaggatatcaattaggagacaatatgcttattggtgttctaagt
aaaacgccaactgaagagcaactagccaattccgcagagaaagactggtttggttctcca
cctatcggattgccctccagacagaaatccgatattttcaatgatcatcttacttataat
ccaccggcatctttaaaattttcccgtgctattgttgagggtataagaattattctgcca
caaaccattatcattatatgcagtgtacttttcatagcatacacaagcatctatctggaa
ggcagaatcccattattattagcattatcaccgttctactatcttggtattgttgcatta
ccagcttttttctttaccgttcttcttaaatggatttttgtaagaaaatataaaaagaca
gaaatcccgatgtacagtctaagagtatggctaagtgagggaattactacgctatacgaa
gctttggctattccttttttcctggatgctttacgcggaacgatgtggctcccaatcttt
atgagatttctgggtgttaaaatcggaaaacgagtatggctgaacacaacagacattaca
gaatttgatatggtatctattggagacgaatctatgttgaatgaagaatgcggaccacaa
acacacttgtttgaggaccggattatgaaaatcggcagtgtaaaaataggaaaacagact
accattagctccagaagtattattctttatgatactgaaattggaaacaatgtacatgta
gatgctttatctttagtgatgaaaggagaaatactttccgataatacatcatggcatgga
agcccggtaagggggaagtaa
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