Elizabethkingia miricola: VO54_02053
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Entry
VO54_02053 CDS
T03757
Name
(GenBank) hypothetical protein
KO
K04485
DNA repair protein RadA/Sms
Organism
elb
Elizabethkingia miricola
Brite
KEGG Orthology (KO) [BR:
elb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
elb03400
]
VO54_02053
DNA repair and recombination proteins [BR:
elb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
VO54_02053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
ChlI
Zn_ribbon_LapB
AAA_22
DnaB_C
AAA
DUF7125
Lon_C
nSTAND3
AAA_24
AAA_14
CobU
AAA_5
nSTAND_NTPase5
AAA_16
NACHT
Rad51
DZR
Viral_helicase1
NTPase_1
RsgA_GTPase
ABC_tran
MCM
TniB
Perilipin
Zn_Ribbon_1
HypA
AAA_29
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
AJW63525
LinkDB
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Position
2226990..2228336
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AA seq
448 aa
AA seq
DB search
MAKVKTAYYCQNCGTQYPQWHGQCKNCGEWNTLVEEVIEKSASKNYSGEKKQHIINIIEV
NAQEEPRIATPSDELNRVLGGGIVLGSVTLIGGEPGIGKSTLLLQLALKMRKRVLYVSGE
ESASQIKMRADRLTDLQNPECFLFTETSVDKILHEAKKLQPQFMILDSIQTLHSSLIESS
PGTVSQIRECSSEIIKFAKETNTPVFLVGHITKDGQIAGPKVLEHMVDVVLNFDGDRNHL
FRLLRANKNRFGSTSEIGIYEMISQGLKEIKNPSEILITKKFEELSGNSVAVTLEGNRPM
LLEIQALVSTAVYGTPQRSCTGFDAKRLNMLLAVLEKRAGFQLGSKDVFLNITGGIKTDD
PALDLAVVASILSSNEDIAISEKYCFAGEIGLSGEIRPVPQIEHRITEAEKLGYDKIYVS
NLNKIPKRKFAIKIEEVSKIEDFHERLF
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaggtcaaaacggcatattactgtcaaaattgcggaactcagtatccgcagtgg
cacggacagtgcaaaaattgtggagaatggaatactttggttgaagaagttatagaaaaa
tcggcttcaaaaaattattccggagaaaagaaacagcatatcattaacattattgaggtc
aacgctcaggaagaaccaagaattgcaactccgagcgatgagctgaatcgtgtattagga
ggtggaattgtactgggttctgttaccttaattggtggtgaaccgggcatcggaaaatct
acccttttgcttcagctggcactaaaaatgcgcaagcgtgttttgtatgtatccggagaa
gaaagtgcttcacaaattaaaatgcgggcagaccgtcttaccgacctccaaaatccggag
tgcttcctttttacagaaacttctgtggacaaaattctgcatgaagcgaaaaagctgcag
cctcagtttatgattctggactcgatacagacattgcattccagtcttatagaaagctct
ccgggaacagtttctcagattcgggaatgttcctcagaaattataaagtttgccaaagaa
accaatactccggtgtttctggtgggccatattaccaaagacgggcaaattgccggtccg
aaagtattggaacatatggtagatgtggttctaaatttcgatggcgacagaaatcacctt
ttcaggttactaagagctaataaaaaccgttttggctccacttcagaaattggtatttat
gaaatgatatctcagggtctgaaagaaattaaaaatccctctgaaatcctgattaccaaa
aaatttgaagagctatccggtaactcggtagctgtaaccctggaaggaaaccgcccaatg
ctactggaaattcaggctttggtaagtaccgcagtatatggtactccacagagaagctgc
actggtttcgatgcaaaaaggttgaatatgcttctggcggttctggaaaaacgtgcaggc
ttccagcttggatcaaaagacgtgttcctgaatataaccggcggtatcaaaacagatgac
ccggcactggatctagcagttgtagcctctattctgtcttccaatgaagatattgctatt
tccgagaagtattgctttgcaggagaaataggtcttagtggagaaatacgccctgttcct
cagattgaacatcggatcacagaagccgaaaaactgggatatgataaaatctacgtttcc
aatctgaataaaatacctaaacggaaatttgccataaagattgaagaagtcagcaaaatt
gaagattttcacgaaagactattttaa
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