Elizabethkingia miricola: VO54_02065
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Entry
VO54_02065 CDS
T03757
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
elb
Elizabethkingia miricola
Pathway
elb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
elb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VO54_02065 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
elb03019
]
VO54_02065 (groL)
03110 Chaperones and folding catalysts [BR:
elb03110
]
VO54_02065 (groL)
03029 Mitochondrial biogenesis [BR:
elb03029
]
VO54_02065 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
elb04147
]
VO54_02065 (groL)
Enzymes [BR:
elb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
VO54_02065 (groL)
Messenger RNA biogenesis [BR:
elb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
VO54_02065 (groL)
Chaperones and folding catalysts [BR:
elb03110
]
Heat shock proteins
HSP60 / Chaperonin
VO54_02065 (groL)
Mitochondrial biogenesis [BR:
elb03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
VO54_02065 (groL)
Exosome [BR:
elb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
VO54_02065 (groL)
Exosomal proteins of other body fluids (saliva and urine)
VO54_02065 (groL)
Exosomal proteins of breast cancer cells
VO54_02065 (groL)
Exosomal proteins of colorectal cancer cells
VO54_02065 (groL)
Exosomal proteins of bladder cancer cells
VO54_02065 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Pho88
REF
Motif
Other DBs
NCBI-ProteinID:
AJW63537
LinkDB
All DBs
Position
2239913..2241538
Genome browser
AA seq
541 aa
AA seq
DB search
MAKEIKFDIESRDALKRGVDALANAVKVTLGPKGRNVVIEKSFGAPHVTKDGVSVAKEIE
LEDKVENMGAQMVKEVASKTNDIAGDGTTTATVLAQAIVREGLKNVAAGANPMDLKRGID
KAVVAVVKNLQSQSQSVGDSSEKIEQVASISANNDETIGTLIAEAFGKVGKEGVITVEEA
KGTDTTVDVVEGMQFDRGYQSPYFVTNPEKMVAELDNPYILLVEKKISSMKELLPVLEPV
AQGGKSLLIISEEVEGEALATLVVNKLRGSLKIAAVKAPGFGDRRKAMLEDIAILTGGQV
ISEEQGFTMENITLDMLGTAEKVSIDKDNTTIVNGGGEEAKIKGRVAQIKAQMETTTSDY
DREKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALV
RAISSLDNLTGANADETTGIKIVKRAIEEPLRQIVANAGGEGSVIVAKVAEGTGDFGYNA
KTDEYVNMLEAGIIDPTKVTRVALENAASVSGMLLTTECVITEVKKDEPAMPMGGGMPGM
M
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaaattaaattcgatattgaatcaagagacgccctaaaaagaggtgttgat
gcattagcaaatgcagtaaaagtaacattaggtcctaaaggtagaaacgtagtaatcgaa
aaatctttcggtgcaccacacgttacaaaggacggggtttctgtagctaaagaaatcgaa
cttgaagacaaagtagaaaacatgggagcgcaaatggtaaaagaagttgcttccaaaact
aatgatatcgcaggtgacggtactactaccgcaactgtattggcacaggctatcgtaaga
gaaggtcttaagaacgtagctgctggtgcaaacccaatggacttgaagagaggtattgac
aaagctgttgtagctgtagttaaaaacctacaatctcagtctcagtctgtaggagattct
tcagaaaaaatcgagcaggttgcttctatttctgcaaacaacgatgaaactatcggtact
ctaatcgctgaagctttcggtaaagtaggtaaagaaggtgtaatcactgtagaagaagct
aaaggtactgatacaactgtagatgttgtagaaggtatgcagttcgacagaggataccag
tctccttacttcgtaaccaacccagagaaaatggttgctgagttagacaatccttatatt
cttttagttgagaagaaaatctcttctatgaaggaattattaccagttcttgagccggtt
gcacaaggtggtaagtctctgttaattatctccgaagaagttgaaggtgaagctttagcg
acattggtagtaaataagctaagaggttctcttaagattgctgctgttaaggctccagga
ttcggtgacagaagaaaagctatgttggaagatatcgctatccttacaggtggacaggtg
atctctgaagagcaaggcttcactatggaaaacattactttagatatgttaggaactgct
gaaaaagtttctatcgacaaggacaacacaactatcgtaaacggtggtggtgaagaagct
aaaatcaaaggaagagtagcacagatcaaagctcagatggagactactacttctgactac
gacagagaaaaacttcaggaaagactagctaagttagctggtggtgttgctgtactttat
gtaggtgccgcttctgaagttgaaatgaaggagaaaaaagacagagtagacgatgcactt
cacgcaaccagagctgctgtagaagaaggtattgttgctggtggtggtgttgctttagtt
agagcgatctcttctttagacaaccttactggtgctaatgctgacgaaactacaggtatc
aaaatcgtaaaaagagcgatcgaggagccgttaagacaaatcgttgctaatgcaggtggt
gaaggttctgtaatcgttgctaaagtagcagaaggtacaggtgacttcggatacaatgct
aaaactgatgagtatgtaaacatgttggaagcaggtatcatcgaccctactaaagtaaca
agagttgctcttgaaaatgcagcttctgtatcaggtatgcttcttacaactgagtgtgta
atcactgaggtgaagaaagacgaaccagctatgccaatgggtggtggtatgccaggaatg
atgtaa
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