Elizabethkingia miricola: VO54_02151
Help
Entry
VO54_02151 CDS
T03757
Symbol
recQ_2
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
elb
Elizabethkingia miricola
Pathway
elb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
elb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VO54_02151 (recQ_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
elb03019
]
VO54_02151 (recQ_2)
03400 DNA repair and recombination proteins [BR:
elb03400
]
VO54_02151 (recQ_2)
Enzymes [BR:
elb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VO54_02151 (recQ_2)
Messenger RNA biogenesis [BR:
elb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
VO54_02151 (recQ_2)
DNA repair and recombination proteins [BR:
elb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
VO54_02151 (recQ_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
DnaD_N
GntR
zf-CXXC
Rrf2
Motif
Other DBs
NCBI-ProteinID:
AJW63623
LinkDB
All DBs
Position
complement(2317252..2319153)
Genome browser
AA seq
633 aa
AA seq
DB search
MIPSRSYNEQILDETLKQFWGYDHFRDQQKEIIQSVLSSNDTLALLPTGGGKSLCYQLPS
LLLEGTTVVISPLLALMKEQVHELNRRGIPAAYLSSEFDDEQEERIYQNLKNEEYKLLYV
SPERLTNRNFLENITDTKLSLIAVDEAHCISEWGSDFRPSYQNIKDFRQAYPYLPCLALT
ATASVKVMQEIQQKLDFKKTNFFKKSYRRDNLYIQIRELSDKYNHILYYLRSNEKSGLIY
VRTRKEAECLSNWLKISGIEQVDYYHAGLPVKEKQIRQNYWLSKNNYTLVSTNAFGMGID
KDNVGFVIHLSPSPSIENYYQEIGRAGRNGQNAETILLWNQSELTQIDDLMRSQLASKTD
YQKVCSYVYSFCQIAEHELPEGFFEIQTNKIQNLTKISRTKIVSILRFLHNQEIIYLKES
KGMSSLELKFNILEVESLGKKDSFFVEKLSRALDGVATHRTYFREKKLTDKMNVDEQTMR
VRLKELHEKGLVDYFDGNSAGIRFLMPRNDKELQNKYWNLFASIQKNKLQKWEEMKFFIK
DTSYCKMRLILSYFGEKETENCGKCNYCLTSKMGTSDREYKKIIFEALMRSPMTLDELAV
HLKFYPKDELLEHLKILLDKGQVRMLNYKTYTL
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgattccgagccggtcttataatgaacagattttagatgaaacccttaagcaattttgg
ggttatgatcattttagagaccagcagaaagaaattattcagtctgtattatcttctaat
gatacactggctttattgcctacaggaggagggaaatcattatgttatcaattgccatct
ttgcttttagaaggcacgacagtggtaatatctccgctcctggctttaatgaaagaacag
gttcacgagcttaatcgaagaggtattcctgctgcttatcttagttcagaattcgatgat
gaacaagaagagcgtatttatcagaatttaaaaaatgaagaatataagctactttatgtt
tctccggaaagattgactaacagaaattttctggaaaatattacggatacaaaactatcc
ctaatagccgtagatgaagctcattgtatttcggaatggggaagtgattttcgtccaagt
tatcagaatataaaagatttcagacaagcttatccatatcttccgtgtcttgcattaacg
gcaacagcttctgttaaagtgatgcaggagattcagcaaaagctggattttaaaaagaca
aatttttttaaaaaatcttatagaagagataatctttatatccagataagagagctttcg
gataaatataatcatattctatattatctcagaagtaatgagaaatcgggtcttatctac
gtgaggaccagaaaagaagctgagtgcctgagtaactggctgaagattagcggtatagaa
caggtggattattatcatgcaggtttaccagtaaaagaaaagcaaatacgtcagaattac
tggcttagtaaaaataactatacccttgtttccaccaatgcattcggaatgggtattgat
aaagataatgttggatttgtaatacatctttctccatccccgtctattgaaaattattat
caggaaataggccgtgcaggtagaaatggacaaaatgcggaaactattttactttggaat
cagagtgagcttacgcagatcgatgatctaatgagaagtcagttagccagcaaaaccgat
tatcaaaaagtttgttcctatgtctattccttctgccagattgcagaacacgaacttccg
gagggtttctttgaaattcagaccaataagattcagaatctcaccaaaatttctcgtact
aaaatagtatctattcttagatttcttcataaccaggaaattatttacctgaaagaatcc
aaaggaatgtcatctttggaactaaaattcaatatattagaagttgaaagccttgggaag
aaagacagtttctttgtagaaaagttatcccgtgcattagacggggttgcgacgcatcga
acctattttcgggagaaaaagcttactgacaagatgaatgttgatgagcaaacgatgcgg
gtacgtttaaaagaattacacgagaagggacttgtagattactttgatggtaattcagct
ggtatcaggtttctgatgccacgaaatgacaaagaattacaaaacaaatactggaatctt
tttgccagtattcaaaagaataaattgcagaaatgggaggaaatgaaatttttcatcaag
gatacctcctattgcaaaatgaggcttattctctcatatttcggagagaaagaaactgaa
aattgtgggaaatgtaactattgcctcacaagtaaaatgggaactagcgacagagagtac
aaaaaaattatttttgaagctcttatgcggtcaccaatgactctggatgaattagctgtt
catctgaaattttatcccaaagatgaactgttggaacacctgaaaattttgttagacaaa
ggtcaggtcagaatgttgaattataaaacttatacactataa
DBGET
integrated database retrieval system
