Elizabethkingia miricola: VO54_02152
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Entry
VO54_02152 CDS
T03757
Symbol
oprF_1
Name
(GenBank) Outer membrane porin F precursor
KO
K03286
OmpA-OmpF porin, OOP family
Organism
elb
Elizabethkingia miricola
Brite
KEGG Orthology (KO) [BR:
elb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
elb02000
]
VO54_02152 (oprF_1)
Transporters [BR:
elb02000
]
Other transporters
Pores ion channels [TC:
1
]
VO54_02152 (oprF_1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl_2
TSP_3
DUF748
Motif
Other DBs
NCBI-ProteinID:
AJW63624
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Position
complement(2319242..2320693)
Genome browser
AA seq
483 aa
AA seq
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MKLNFASVALAFVLPVAIYGQDSTAVATTSAAQGQYPNAYTSGSANVSPFTNKSKRFNDW
SISAGAGTVIMKSGSLYSLHDESGSKNLFGWTAYFSVDKAITHAFGLKLQYDKGETRQGW
VNTKDHVAGGPGGRTQYDAITILGDVNISNLFRRVDNHSPYRWALHAYGGVGTIAYRSYL
QEPGPAYNQSLTKEVKPFKLNSFYAQLGTGLKYRVSKSFDLEGRVMYSLTGGKGFDGARG
NYVDPARAGNNDMINATLGLTYNIGKHESHLFWHDPLQEIYYKLDVLENKSQDIEVCKKG
DADNDGVCDDWDRELNTPAGARVDGSGRALDVDLDGVIDLYDKCVTVPGPPENNGCPTNN
QVVTEVSRSLEGIEFDLNSDRILSSNTAILNSAVNYINSSEMGSKYTVVGAADTRGTVQY
NQKLSQKRANNVKNYLIQSGVQSSRLDAVGHGKSDLKYPECNPASKCPEWKNRANRRVYF
QQK
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaaatttcgcaagtgtagctttagcatttgtattgcctgttgccatttacggt
caggattctacagctgtcgctacaacatctgcagcccaggggcaataccccaacgcgtat
acgtctggttcagctaatgtatctcctttcaccaacaaatctaaaagatttaatgattgg
tctatttctgccggagcaggtactgttatcatgaaaagtggtagtttgtattctcttcat
gatgaatctggatctaaaaacttatttggctggacagcttattttagtgtagacaaagct
attactcatgcttttggtttgaagcttcaatatgacaaaggagagacaagacaaggttgg
gtaaatacaaaggatcatgttgctggaggccctggagggaggacacaatatgatgcgatc
acaatcttgggagatgttaatatttctaatcttttcagaagagtagataatcattctcct
tacagatgggcacttcatgcttacggaggtgtaggtactattgcttacagatcttatttg
caagagcctggacctgcttacaatcagtctttaacaaaagaggtaaagccgtttaaacta
aactcattctatgcacaattaggtactggattaaagtacagagttagcaaatctttcgat
ttagaaggtagagtgatgtattctcttacaggaggaaaaggctttgatggtgcaagagga
aattatgtagatcctgcaagagctggtaacaatgatatgatcaatgcaacattaggtcta
acctataacatcggaaaacacgaatctcatttattctggcatgatccattacaagaaatc
tattataaacttgatgtcttagaaaataagagtcaggatatagaagtatgtaagaaaggt
gatgctgataacgatggtgtatgtgatgattgggatagagagctaaatactcctgcaggt
gcaagagtagatggttccggtagagcattggatgtagacttagatggagtaattgatctt
tatgacaagtgtgtaactgttcctggaccaccagaaaataacggatgcccaacgaacaat
caggttgttactgaagtttcaagaagtttagaaggtattgaatttgatctaaattcagat
agaatactttcttctaatactgctatcttaaacagtgctgttaactatattaactcatct
gaaatgggttctaaatatacagttgtaggtgctgctgatacaagaggtacagttcagtat
aaccagaaattatctcagaaaagagctaataatgttaagaactatttaatccagagtgga
gttcagtcttcaagattagatgctgtagggcatggtaagagtgatcttaagtatcctgaa
tgtaatcctgcaagcaaatgtcctgaatggaaaaacagagctaacagaagagtttatttc
caacagaaataa
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