Elizabethkingia miricola: VO54_02238
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Entry
VO54_02238 CDS
T03757
Symbol
addA
Name
(GenBank) ATP-dependent helicase/nuclease subunit A
Organism
elb
Elizabethkingia miricola
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GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AJW63704
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Position
2396145..2399276
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AA seq
1043 aa
AA seq
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MNTYTVINASAGSGKTYSLIKNLLKICLRNNRPEIIRNILALTFTNKAANEMKERILSWL
GDFTSDRYMDIQALIDIQKELKAEGIYLTLEDLHYRSKNLLDYILHHYSALNISTIDKFN
TRLIRSFAYELGLPQNFNLEINAAPFLLEAVDQTLDKIGDNEQLSVAFMDYVNYNLDNQK
RENLQKTLFDSAKNFNSDIHYFTLGKNKNFDWDAYSDEKEKLRKEIKQLMKDAKEKALSS
VELIKSRDLLTEDFAGGKVNSIAVFFEKYLNTESPALPTNSEEKALENYNKLSGAKSKNR
ADEIAAILPILLDNRKNIILNHLEIEKKKKIHTALLPLKVNKEIQDQLKFIEDENDLLML
SRFNVLINEQLRDEPSAFIYEKVGEQYQHYFFDEFQDTSFLQWQNFLPLRDHILSEESTS
FTLVGDPKQSIYRFRGGDAQLMLDIINKKEETPRYADIHNLEHNYRSSYNIVEFNNKLYQ
YLSDFVEEDYRDIFGTLAQQRPHSENTGRVKINLVENNSADVFFDDVAEKMKNDIQECLN
NGFSFSDIAILCRGNNDILKFSQSLSALEVDYKNEKQFIRTISEKGLTLDLSSTINAVIQ
YLLWYSFPKNRRYLVLCLYYLNKSGRINIEDFSAELSDILLAENTLSLQEKVEEKYNLKL
TSDIPNLNTYSFIESILQEFSVKGKETDYLINFLELLYGFFQNMSATLKDFLQYWQEEGH
SISIQASENTDAINLMTIHKSKGLEFPVVFLPMRNSHKDTQFNDWYDISDSREQPLQTVN
LTSFNKDLAQYDQGMTSFNEENTYKNKIDRFCIQYVATTRAVEQMFFYIQKPGKTSGYLE
IYDFIAGQKNTDEDSFDFFETDEKHLLKQHKKTKQHTGQDLHIGSLRASDETFSTEIKIA
TPSKSYQERNESVKTGIFTHQILEKVVTKDDAPYVLKQYLLDGTITQAEFEAVQIRLNKL
FEAYPQYFDGHYEVINERDILFSDKGESRLLRTDRLLKAPEGWIIIDFKTGAEREKYEAQ
IDIYKKALEKSGEKVWKVEVLYI
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgaacacttataccgttataaatgcctctgcaggctccgggaagacctatagtcttatc
aaaaatctcctgaagatctgcctacgcaataacagacctgaaattatccgaaatattctg
gcgctcactttcaccaataaagcggccaatgaaatgaaggaaaggattctgtcgtggctt
ggggatttcacatcggatcgttatatggatattcaggcattgattgatattcagaaagaa
ttgaaagcagaaggtatttacctgactcttgaagaccttcattacagatccaaaaatcta
ctggattacatcctccatcattattcagcactgaatattagtactattgataagttcaac
accagattaattcgctctttcgcctacgaactgggattgcctcagaatttcaatctggaa
attaatgccgccccctttcttctggaagcagtagaccagacactggataaaattggtgat
aatgagcagctttctgtagcatttatggattatgtaaactacaatctggataatcagaag
cgagagaacctacagaagactttattcgatagtgcaaagaacttcaatagtgacattcat
tattttaccttaggaaagaataagaattttgactgggatgcttattctgatgaaaaagaa
aagttaaggaaagaaataaagcaactgatgaaagatgctaaagaaaaagctctttcgtct
gttgagctaataaagtcccgcgatttgttaacagaagactttgccggtggtaaagtaaac
agtattgctgtcttttttgaaaaatatctgaataccgaatcccctgcccttcctaccaac
tcggaggaaaaagctttggaaaactacaataagctgtccggtgccaaatctaaaaaccgt
gccgatgagatcgctgctattctccctattcttttggataacagaaaaaatattatcctt
aatcatctggaaatagaaaagaagaagaagatccatacagctctccttccgctgaaagta
aataaagagatacaggaccagctaaaatttattgaagacgaaaatgacttgctaatgctc
tcccgcttcaatgtattaatcaacgaacaacttcgcgacgaaccttctgcatttatatac
gaaaaggttggtgagcaatatcaacattattttttcgacgagtttcaggatacttcattc
ctgcaatggcagaatttccttcctcttcgggatcatattctttccgaagaaagtaccagc
tttactcttgtaggcgatccaaaacaaagtatatacagattccggggcggagatgcacaa
ttgatgctggacattattaataaaaaggaggagactcccagatatgcagatattcataat
ctggagcataattaccgtagtagttataatattgtagaatttaacaataaactataccag
tatctttctgattttgtagaggaagattatcgcgacatatttggtactctggcgcagcag
aggccacattcggaaaatacaggccgcgtaaaaataaaccttgtagaaaacaatagtgca
gacgttttctttgacgatgtagccgaaaaaatgaaaaatgatattcaggaatgcctgaac
aatggttttagtttttcggatattgctattttatgtcgaggcaataatgatattctaaag
ttctcccagtcgctttcggctctggaagtagattataaaaatgaaaaacaatttatccgg
actatttcagaaaaagggctcacactcgatctttcttcaactatcaatgctgttatccag
tatctgctatggtattcgtttccgaaaaacagaagatatcttgttctttgcctttactat
ctgaataaatcgggtcgtataaacatagaagacttcagtgctgaactttctgatattctt
ttggctgaaaataccttgtcactgcaagagaaagtagaggaaaaatacaacctgaagctt
acttccgatattccaaatctcaatacctatagttttatcgaaagtattttacaggaattt
tcggtaaaaggaaaggaaaccgattacctcatcaattttctggaacttttatatggcttc
ttccaaaatatgtcagccacactaaaagatttccttcagtactggcaggaagaggggcat
tctataagtatccaggcttcagaaaacacagatgccattaacctgatgacgattcataaa
tctaaaggacttgaattccctgtcgtttttcttcctatgagaaacagtcacaaggatact
cagtttaatgactggtatgacatttcggattccagagaacagcctttacaaacagtaaac
cttacttcttttaataaagatctcgcacaatatgatcagggcatgacatcttttaatgaa
gaaaacacctataaaaataaaatcgacaggttttgtattcagtatgtagcaactacaaga
gcggtagagcaaatgtttttctatattcagaaaccaggaaaaacttcgggatatctggaa
atatatgattttattgcggggcaaaagaatactgatgaggatagtttcgattttttcgaa
acagatgaaaagcatttgctaaaacaacataaaaaaacaaaacagcatacaggacaagat
cttcacattggctcgttaagagcttctgatgaaacctttagtactgaaataaaaattgcg
acaccttccaaaagctatcaggaacgaaatgaaagtgtaaaaacgggtatattcactcac
caaattctggaaaaggttgttacaaaagatgacgctccatatgttctgaaacaatattta
ctggatggtactattactcaggcggaattcgaagctgtacagattaggctgaataagtta
tttgaagcatatccgcagtatttcgatggtcattatgaagttattaatgaacgggatatt
ctgttttctgataagggagaatcccgcttactgcgtaccgaccgtttgctaaaagcacct
gaaggctggattattatagactttaaaacgggagccgaacgggaaaaatatgaagcccag
atcgatatctataaaaaggcattagaaaaatccggagaaaaagtctggaaagtggaggta
ttatatatctaa
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