Elizabethkingia miricola: VO54_02258
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Entry
VO54_02258 CDS
T03757
Symbol
rnc
Name
(GenBank) Ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
elb
Elizabethkingia miricola
Brite
KEGG Orthology (KO) [BR:
elb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
VO54_02258 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
elb03019
]
VO54_02258 (rnc)
03009 Ribosome biogenesis [BR:
elb03009
]
VO54_02258 (rnc)
03036 Chromosome and associated proteins [BR:
elb03036
]
VO54_02258 (rnc)
Enzymes [BR:
elb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
VO54_02258 (rnc)
Messenger RNA biogenesis [BR:
elb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
VO54_02258 (rnc)
Ribosome biogenesis [BR:
elb03009
]
Eukaryotic type
90S particles
RNase
VO54_02258 (rnc)
Prokaryotic type
rRNA processing factors
VO54_02258 (rnc)
Chromosome and associated proteins [BR:
elb03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
VO54_02258 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
CCDC113_CCDC96_CC
Dicer_dimer
Motif
Other DBs
NCBI-ProteinID:
AJW63724
UniProt:
A0AAQ1SX56
LinkDB
All DBs
Position
2419469..2420239
Genome browser
AA seq
256 aa
AA seq
DB search
MEIKSYFSNLLKKRTKTLSDKDKNFKAAINRLVGYKVNDLRLFKEAFTLKSPNTTKEAFN
YERLEYLGDAVLGSIVSCHIFHEYPNANEGFLTQMKSKVVNRKNLNALGERLELTRFLQN
KEENTTLSENIHGNLFEALVGAIYQDIDYDKCREIILGQLLTKQDILNLENKIISYKGLL
LEWGQKQKIHLRFETTEENYVNKTVHFRSSVWMEDRQISNASEASKKKAEEKAAQRAYYA
LQKKENINGESKKNTP
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggagattaaaagctatttttccaatcttttaaaaaaacgaaccaaaactttatccgat
aaagataaaaattttaaagccgccattaacagactggtgggctacaaagtgaatgacctt
agattattcaaagaagccttcactttaaaatctccgaataccacaaaagaagccttcaac
tacgaaagattagaatatctgggggatgctgtattaggaagtattgtttcctgccacatt
tttcatgaatatcctaatgccaatgaaggtttccttacacagatgaaatctaaagtggta
aaccgtaaaaatttgaatgcgctgggagagcgtctggaacttaccagatttttacaaaac
aaagaagagaataccactttgagtgaaaatatccacggtaatcttttcgaagcattagtt
ggcgctatttatcaggacatagactatgataaatgcagagaaataattctgggccagctt
ctgactaaacaggacatccttaatctggaaaataagattatcagctacaaaggattatta
ctggagtggggtcaaaagcaaaaaattcacctccgtttcgaaactactgaagagaactat
gtcaacaagactgttcatttccgtagcagcgtatggatggaggacagacaaatttccaat
gcatccgaagcttccaagaaaaaagctgaggaaaaagctgcacagcgggcttactacgca
ttgcaaaaaaaagaaaacattaatggcgaaagtaaaaaaaatacgccttga
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