Elizabethkingia miricola: VO54_02272
Help
Entry
VO54_02272 CDS
T03757
Symbol
rlmCD
Name
(GenBank) 23S rRNA (uracil-C(5))-methyltransferase RlmCD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
elb
Elizabethkingia miricola
Brite
KEGG Orthology (KO) [BR:
elb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
elb03009
]
VO54_02272 (rlmCD)
Enzymes [BR:
elb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
VO54_02272 (rlmCD)
Ribosome biogenesis [BR:
elb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VO54_02272 (rlmCD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
Cons_hypoth95
TRAM
Methyltransf_11
MTS
Methyltransf_15
TRM5-TYW2_MTfase
N6_N4_Mtase
PCMT
RrnaAD
UPF0020
Methyltransf_4
PrmA
FtsJ
Methyltransf_12
Methyltransf_2
NpmA
2-ph_phosp
Motif
Other DBs
NCBI-ProteinID:
AJW63738
LinkDB
All DBs
Position
complement(2431866..2433278)
Genome browser
AA seq
470 aa
AA seq
DB search
MQKKKKNVILENIKLLSAGAKGVSVGKTEDGKTILVSGAVPGDLVNARMKKSKKNYIEAE
AIEILEESPDRVDARCMHFSVCGGCKWQNLSYEKQLEFKEDEVLNNIRRIGGIDGFEAVP
ILGSAEQYFYRNKMEFSFSNARWLTLEEVNSTEEIADRNALGFHIPGQWSKILDLKECFL
QEDPSNNIRLAVKEYAEENNLEFFDVRNQEGFLRTLMMRQNSKGEWMVLFQLFEENETER
VKLLDYLLQKFPQIHTLLYAINPKGNDSIYDLDIQTYYGEGFLYEEMDGLRFKIGPKSFF
QTNYKQALELYRKTLEFADLKGDEVVYDLYTGTGTIAQYVARNAKQVIGIEAVQEAIDAA
KEHAELNGLTNCTFYCGDMKDIFNQEFLESHPKADVLITDPPRDGMHAKVVEQILNLSPE
KIVYVSCNSATQARDLAMLKEHYNLVKVLPVDMFPQTHHVENIALLIKKS
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaaaaaagaagaatgtaattcttgaaaatatcaaactcctttcagccggtgcg
aaaggagtttctgttggtaaaacagaggatggtaaaaccattttggtgagtggggctgta
cccggagatctggtaaacgcccgtatgaaaaagtcgaaaaagaactatattgaagctgaa
gcaatagagattctggaggaatctcctgacagagtagatgccagatgtatgcatttcagt
gtatgtgggggatgtaaatggcagaatcttagttacgaaaagcaattagagtttaaagag
gatgaagtactgaacaacatccgcagaattggtggtattgatggttttgaagctgtgcct
attctgggatctgcagaacagtatttttacagaaataaaatggagttttctttctctaat
gcacgttggcttacattagaagaagtgaattctaccgaagaaatagctgacagaaatgcg
ttaggatttcatattccgggacagtggagcaagattctggatctgaaggagtgtttcctg
caagaagatccatccaacaatattcgtcttgctgtaaaagaatatgcagaggaaaataac
cttgaattctttgatgtaagaaatcaggaaggttttcttcgtacgttaatgatgcgtcag
aactctaaaggagaatggatggttttattccagctttttgaagagaacgaaacagagcgt
gtaaagcttcttgattacttattacagaagtttccacaaatccatacattgctttatgct
attaatccaaaaggcaatgatagtatttatgatctggatattcagacctactacggagaa
ggatttttgtatgaagaaatggatgggcttagatttaaaatagggccaaaatcatttttc
cagaccaactataagcaagctttggaattgtaccgtaagacccttgaatttgctgatctg
aaaggagatgaagttgtatacgatctttatacaggtacaggtactattgcacaatatgtt
gcccgtaatgcaaagcaagtaatcggtatagaagcggtacaggaggcgatagatgcagct
aaagagcatgcggaactgaatggtcttaccaattgtacgttctactgtggagatatgaaa
gatatcttcaatcaggaatttttagaatctcaccctaaggcagatgttttaattactgac
ccgccaagagatggtatgcatgctaaggttgtagagcagatacttaatctgtcaccagag
aaaattgtatatgtaagctgtaattctgcaacgcaggccagagatttggctatgttaaaa
gaacattataacttagtgaaggttttgccggtagacatgttcccgcagacccatcacgta
gagaatatagcactgcttattaaaaaatcatga
DBGET
integrated database retrieval system
