Elizabethkingia miricola: VO54_02417
Help
Entry
VO54_02417 CDS
T03757
Symbol
msbA
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
elb
Elizabethkingia miricola
Pathway
elb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
elb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VO54_02417 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
elb02000
]
VO54_02417 (msbA)
Enzymes [BR:
elb01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
VO54_02417 (msbA)
Transporters [BR:
elb02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
VO54_02417 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
AAA
AAA_22
nSTAND3
APS_kinase
ABC_ATPase
AAA_25
AAA_18
RsgA_GTPase
AAA_16
AAA_5
RuvB_N
DEAD
AAA_29
AAA_24
DUF5056
AAA_23
TsaE
AAA_14
NACHT
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AJW63877
LinkDB
All DBs
Position
2581801..2583612
Genome browser
AA seq
603 aa
AA seq
DB search
MNLYFRILKFAKPHQKYIYGSLFFNILYSLLQIASIGTLLPVLGILFGTEKQEIKGDGFS
DNLKRTLYTFINNEIEKHGSLNVLLWLCIITGVAFFLRNIVRYLGAYLLIFYRVGVTKDL
RGSMYRKILTLPVSFFSEQRKGDLMSRMSNDVGEVENNILGSLVDLVNSPFMLIGTLASL
FFLNPQLTLFSLLVLPVMGTLISLIGKSLKKDSHKAQNELGNVFSIVDETLKSAKIIKIF
NADKLLDNRFTGSMTKWINHSISLGRKRELASPMSEFLGAITFLIITWYGGYQILVNKNM
QPQDFLVFLGMFFQILPPAKSLATSISNIQKGEASLVRVMDILDADVKVDEIANPIPVSE
LKDRIEFKNVGFYYNKENLILKNFNLSIPKGSTVALVGQSGSGKTTIANLLARFYDVTEG
TITVDGNNIKDLKLKEYRAILGMVTQESVLFNDTIYNNIAMGKENATREEIIEAAKIANA
HQFIESLPDGYETNIGDDGNKLSGGQKQRVSIARAVLKNPPIMILDEATSALDTESERFV
QEALEKMMENRTSLVIAHRLSTIQKADWIVVMERGVIVEQGTHHNLMDNNSVYRKLVDLQ
NFD
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgaacttatactttaggattctaaaatttgctaaaccacaccaaaaatatatttacggg
agtttattcttcaacattttatactctctacttcagatagcatccatcggaacgctttta
cctgtactgggaatactcttcggtacagaaaagcaggaaataaaaggcgacggtttttct
gacaaccttaaaaggacgctctacacttttattaataatgaaatagaaaagcatggcagt
ttaaatgtattgctttggctttgtattattaccggcgttgctttctttctgagaaacatt
gtccgttatcttggggcttaccttctgatcttctaccgcgttggagtaacaaaagatctt
agaggatctatgtacagaaagattcttacgcttcctgtatctttcttttcggagcaaaga
aaaggagatcttatgtccagaatgtctaatgatgtcggcgaagtagaaaataatattctg
ggaagccttgtagacctcgtaaactcaccgtttatgttaataggtacactggcttcttta
ttctttttgaatccacagttaacacttttcagtttacttgtattacctgtaatgggaaca
ttaatttctcttatagggaaaagtctgaaaaaggattctcacaaagcacagaatgaattg
gggaatgttttctccatcgtagatgaaacactgaagtccgcaaagattattaagattttc
aatgccgataagttactggataatcgttttactggttctatgaccaaatggatcaatcac
tccatcagccttggcagaaaaagagagctagcctctcctatgagtgaattcttaggagct
attactttccttattattacatggtacggaggttaccagattctggtaaataagaatatg
cagccacaggactttttagtttttctgggtatgttctttcaaattttacctcctgcaaag
agcttagcaacatctatatccaatatccaaaaaggtgaagcgtcgcttgtaagagtaatg
gatatattagatgccgatgttaaggttgacgaaatagcgaatccgattccggtttctgag
ctgaaagatcgtattgagttcaaaaacgtaggtttctattataacaaggaaaatctgatt
ctgaaaaactttaatcttagtattccaaaaggcagtactgttgctctggtaggacaaagt
ggtagcggaaaaacaacgatagccaaccttctggctcgtttctatgatgtaactgaaggc
actataacagtagacggcaacaatattaaagacttgaaattaaaggaataccgagctatt
ctgggtatggtaactcaggaatcagtattattcaatgatacaatctataacaatattgcc
atgggtaaagaaaatgctacccgtgaggaaattattgaagcggcaaaaattgctaatgca
catcagtttatagaaagtcttcccgacggctatgaaaccaatattggagacgatgggaac
aagctatccgggggtcagaaacaaagagtatcaatagcccgtgccgtgctgaagaatcca
ccaatcatgattctggatgaagctacatcagctctggatacagagtctgaacgttttgta
caggaagctttggaaaaaatgatggaaaacagaacctctctggtgattgcccacagactg
tcgacaatccagaaagcagactggatcgttgtgatggaaagaggtgttattgttgagcag
ggtacccatcataatctgatggacaataatagtgtataccgtaaattagtagatcttcag
aactttgattaa
DBGET
integrated database retrieval system
