Elizabethkingia miricola: VO54_02658
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Entry
VO54_02658 CDS
T03757
Symbol
pbp
Name
(GenBank) Beta-lactam-inducible penicillin-binding protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
elb
Elizabethkingia miricola
Pathway
elb00550
Peptidoglycan biosynthesis
elb01100
Metabolic pathways
elb01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
elb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VO54_02658 (pbp)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VO54_02658 (pbp)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
elb01011
]
VO54_02658 (pbp)
Enzymes [BR:
elb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
VO54_02658 (pbp)
Peptidoglycan biosynthesis and degradation proteins [BR:
elb01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
VO54_02658 (pbp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AJW64115
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Position
complement(2829828..2831816)
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AA seq
662 aa
AA seq
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MKPYFRILAFISIIACIFVARLAYLQLFTDRYALNAANTSIKIEYVIPQRGVIFDRNGKI
MVGNQPSFEISFTQALMKPDFDTISFCTLVGMNKTQFIQRIEEVKAEKYYSKLTPMTFIK
DLGREDIARIQERIFKYPAFSIVSRPQRQYEINTSGNLLGYTNQVNPSYIKRDSTYYLPG
DIAGMTGVEKSYEKQLRGVKGMKYIQKDIRLRNIGSYKDGKLDKQVVPGDDLTLTIDYDL
QKIAEEMLVNKHGAIVAIDPNNGEILVLASGPDIDPNQFTGPEKNKNLYRLQVDTLYDNK
PTFDRSLQAAYPPGSTFKLLTALAGMQMGVMDEKTVYPCGGGFNYRGLRIKGHGGADPLI
PAIRVSSNCYFSYAFISIMNKYPGDPTKGVDEWKKIMNSFGVGEFLNNDLAVGSKGRIPS
GEFYEKRSGTKNWFSDITRNGAIFNGMGQGDVLLTPLQMANAVAAIANKGWYITPHIVKL
VNGKPNPDPRFKEKHKTLVDPKHFEPILKGMEQVVLAGTARSLRSSDFTQLAKTGTAQVP
QGKDNSIFVLIAPADKPKIVVAAVMEHAGFGATWAGPAATVVAEKYITGELKREHLYKKM
ITSSFMPEYKRQWIVDLKRKGLYVEPNKQDSIQKKKKTEDSLRALRISAEQPKPQQQNKT
KN
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaccgtatttcagaatattggcctttattagtattatcgcgtgcattttcgttgcg
cgcttggcctatttacagttgtttaccgacaggtatgctttgaatgcagccaatacctct
attaaaatcgaatatgttatccctcagcgcggtgtcatatttgacagaaatggtaaaatt
atggtaggtaaccagccttccttcgaaatatcattcactcaggcgcttatgaagcctgat
tttgatactatttctttctgcaccctggtaggaatgaacaaaacacagtttattcaacgt
atagaagaggtaaaggccgaaaaatattactcgaagcttactcctatgacctttatcaag
gatttgggaagagaggatattgccagaattcaggaacgtatttttaaatatccagcattt
tcaattgtttcgagaccacaaaggcaatacgaaataaatacttcaggaaaccttttaggt
tataccaaccaggtaaacccttcttatatcaaaagagattccacctattatcttccgggt
gatattgccggcatgaccggagtcgaaaaatcttatgaaaagcagcttcgcggtgttaaa
ggaatgaagtatatccaaaaagatatccgtctgagaaatattggttcgtataaagatggt
aaactggataaacaagttgttcccggggacgacctaacactgacaatagactatgacctt
cagaaaatagctgaagaaatgctggttaacaaacatggcgctattgtcgctatagatcct
aataacggagaaatactggttttagcttccggtccggatatcgatccgaatcagtttact
ggtcctgagaaaaataaaaacctgtacagactacaagtagatacactttacgataacaaa
ccaacattcgacagatcattacaggcagcttatcctccgggatctacattcaaactactc
acagctttggccgggatgcagatgggtgtaatggatgaaaagacagtatatccttgtggt
ggtggatttaattacagaggtctgagaattaaggggcatggcggagcagatccgttgatc
cctgcaatacgggtttccagtaactgttatttctcctatgcttttatttcaattatgaat
aaatatccgggagatcctaccaaaggagtggacgaatggaaaaaaataatgaatagcttt
ggcgttggtgaattcctgaacaatgacttagccgttggttccaaaggacgtattccgtcc
ggagaattctatgaaaaaagaagtggaactaaaaactggttctccgatattaccagaaac
ggagctatattcaatggtatgggacagggagatgtacttcttacgcctcttcagatggct
aatgcagttgctgcaattgccaacaaagggtggtatataacaccacatattgtaaaactt
gtcaacggaaaacctaatccggatccccgctttaaggaaaagcacaaaactcttgtagat
cctaaacattttgagccaattctgaaaggtatggagcaggtggtattagccggtacagca
agaagtttgagatcttcagactttacacagctggccaaaacaggtacagcacaggttcca
cagggtaaggataactctattttcgttctgattgcacctgcggacaaaccaaaaattgtg
gtagcagcagtaatggaacatgccggattcggtgccacatgggcaggtcctgctgcaaca
gtagtagctgaaaaatatataaccggtgagcttaaacgtgagcacctgtacaaaaaaatg
ataacttccagctttatgccggagtataagagacaatggattgttgacctgaagagaaaa
ggcctttatgtagagcctaacaaacaagattctatccagaaaaagaaaaaaacagaagat
agcctgagggcattgagaatatccgcggaacaaccgaaaccgcagcaacaaaataaaacc
aaaaattag
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