Elizabethkingia miricola: VO54_03257
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Entry
VO54_03257 CDS
T03757
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
elb
Elizabethkingia miricola
Brite
KEGG Orthology (KO) [BR:
elb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
elb03016
]
VO54_03257 (truA)
Enzymes [BR:
elb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
VO54_03257 (truA)
Transfer RNA biogenesis [BR:
elb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VO54_03257 (truA)
Prokaryotic type
VO54_03257 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Acid_PPase
EFG_III
Motif
Other DBs
NCBI-ProteinID:
AJW64688
LinkDB
All DBs
Position
3486718..3487491
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AA seq
257 aa
AA seq
DB search
MRIENLDKNTNKLRYFIAFSYNGASFFGFQIQPNEISVQETLEKALSTLLREDIKITGAG
RTDTGVHAKKMYAHFETSNVLGDQLVHKLNSFLPPSIAVQEVFQVSKDLHARFSALYRTY
EYYISLKKNPFTENSAWQLWRKKLDIDAMNKACEILFQYKDFTSFAKLHTDNKTNFCEMK
KAVWEQRGDELVLTISADRFLRNMVRAIVGTMVEVGTGKIKPEDIHDIIEKKNRNAAGTS
APAHGLYLVDVGYNFDN
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtatcgaaaatctagacaaaaatacaaacaaattacgctatttcatcgctttttcc
tataacggcgcatccttcttcgggtttcagatacaacctaacgaaattagtgtccaggaa
actttggaaaaagcattgagtacattactgcgtgaagacattaaaataacaggtgccgga
agaacggataccggggttcatgctaaaaaaatgtatgcacattttgaaaccagtaatgta
ttgggagatcagctggtacataagctaaacagctttttaccaccaagtattgcggttcag
gaggtttttcaggtttctaaagatctgcatgcaagattcagcgcgttatacaggacttat
gaatattatatttcgctgaaaaagaatccgtttacagaaaactctgcatggcaactttgg
cggaaaaagctggatatagatgcaatgaataaagcctgtgaaattttgtttcagtataaa
gattttacaagttttgcaaaactgcacaccgataacaaaaccaatttctgcgaaatgaaa
aaagcggtgtgggagcaacgtggagatgaactggtattgaccatttcggctgaccgtttt
ttacgaaatatggttcgtgcaatagtagggacaatggtggaagtgggtaccggaaaaata
aagccggaagatatccatgatattattgaaaagaaaaaccggaatgccgccggaacatcg
gctcctgcccacggattgtatctggtggatgtaggttataactttgataattaa
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