Elizabethkingia miricola: VO54_03351
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Entry
VO54_03351 CDS
T03757
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
elb
Elizabethkingia miricola
Pathway
elb00521
Streptomycin biosynthesis
elb00523
Polyketide sugar unit biosynthesis
elb00525
Acarbose and validamycin biosynthesis
elb00541
Biosynthesis of various nucleotide sugars
elb01100
Metabolic pathways
elb01110
Biosynthesis of secondary metabolites
elb01250
Biosynthesis of nucleotide sugars
Module
elb_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
elb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
VO54_03351 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
VO54_03351 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
VO54_03351 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
VO54_03351 (rfbB)
00525 Acarbose and validamycin biosynthesis
VO54_03351 (rfbB)
Enzymes [BR:
elb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
VO54_03351 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
adh_short
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
AJW64782
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Position
3587757..3588836
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AA seq
359 aa
AA seq
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MKNIIITGGAGFIGSHVVREFVIKNPEITIINLDALTYAGNLENLKDVENCPNYVFEKAD
ITKAEELRKIFEKYNPDAIVHLAAESHVDRSITDPNAFINTNVIGTANLLNLCREFWTLN
PEHTHGRFPNELRTNLFYHVSTDEVYGSLGETGFFLETTAYDPQSPYSASKAASDHLVRA
YGNTYGMPFIVSNCSNNYGPNHFPEKLIPLCISNILNEKPLPIYGDGIYTRDWLYVIDHA
RAIHQIFNEAKTGETYNIGGFNEWQNIDLVKELIKQLDAKLGKPEGHSEKLITFVKDRPG
HDKRYAIDATKLNQDLGWKPSVTFEEGLSKTIDWYLDNKEWLENVTSGDYQKYYENQYS
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatattattattacagggggtgccggttttatcggatcccatgttgtaagggaa
tttgtaataaaaaatcctgagattacgattatcaatctcgatgcattgacttatgcagga
aatctagaaaatttgaaggatgttgagaactgccctaattatgtttttgaaaaggcagat
attacaaaagctgaagaattaagaaagatttttgaaaagtacaatccggatgctatagtt
catttagcagcagaaagccatgtagacagaagtattacagatccaaatgcatttattaat
acgaatgttattgggacagctaacttattaaacttatgtcgtgaattttggacacttaat
cctgagcatacacatggtagatttcctaatgaattaagaacgaatcttttctatcatgtt
tctacagatgaggtatatggaagtttaggagaaacaggtttctttttagaaacaacagct
tatgatcctcagtcaccttattctgcttccaaagcggcatcggatcacttagtaagagca
tatggtaatacgtatggaatgccatttatagtttctaactgttccaataattatggtcca
aaccatttccctgagaagttgattccattgtgcatttctaatattttaaatgaaaagcca
ttgccaatatatggagatggaatatatacgagagactggctgtatgtaatagaccatgcc
agagcaattcaccagatatttaatgaggctaaaactggcgaaacatataatataggcggt
tttaacgagtggcagaatattgatctggtgaaagaactcataaagcaattggatgctaaa
ttaggtaaaccggaaggccattctgaaaaacttattacatttgtgaaagatcgtccgggg
catgataagcgttatgcaattgatgcaacaaaacttaatcaggatttaggctggaaacct
tcagttacttttgaggaagggctatctaaaacaattgattggtatttggataataaagag
tggttagaaaatgtaacttctggggattatcaaaagtattatgaaaatcaatattcataa
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