Elizabethkingia miricola: VO54_03461
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Entry
VO54_03461 CDS
T03757
Name
(GenBank) Heparinase II/III-like protein
KO
K20525
oligo-alginate lyase [EC:
4.2.2.26
]
Organism
elb
Elizabethkingia miricola
Brite
KEGG Orthology (KO) [BR:
elb00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
VO54_03461
Enzymes [BR:
elb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.26 oligo-alginate lyase
VO54_03461
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GFIT
Motif
Pfam:
Hepar_II_III_C
DUF4962
Motif
Other DBs
NCBI-ProteinID:
AJW64891
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Position
complement(3704697..3706571)
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AA seq
624 aa
AA seq
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MKYITSIVFTLLMSFSCVNAQQSFDAIASVSHPRLFMQKDEEKTLISAITHNSDLKTVDL
ALKKSGNSIINLPLLEHKKIGKRLLHISREALRRVFVLSYLYRTTKEQKYFDAAEKELLQ
LSSFTDWNPTHFLDVAEMTLAVSIGYDWLYDKLSGTSREKIRTAIIEKGLKPSLDKKYNS
WLKVQNNWNQVCNAGVSLGAIAVYENDPAIASQIISRAIESIKVPMKRYEPSGTYPEGYS
YWAYGTTYNIVFLDALKKLTNNDFGLGHAPGFTATAEYFQHLMGTSGLSFNYSDSMSSPE
MSSATFWFARNLNNPSLVWNDLQYIRNPDKAKQLSSDRFLPLIPIWGKDIQKLSPQRPEK
LFWAGEGDNPVVMMRSSWTSPKALFLGYKLGSPSVEHGHMDVGSFVFDSDGVRWAMDFGQ
QEYESLESKNIDLWSYGQNAQRWTVFRYNSLSHNMLTFDNDQQYSKGKATFLKKSDNKNF
SFATSDLSDLYKNKVPKVVRGVALKDQAYALVQDEVQTGSAPTIVRWRMLTPANAEILSP
TEILLKKDNKKLLLKINSATPVTLKTWSTAPTNSYDAPNPGTVLVGFETELPANTKSTFA
VQLIPRGKMKKRFETKVQPLEEWK
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatattacttctattgtatttacattgttaatgtcttttagctgtgtaaatgca
caacaaagctttgacgcaattgcttctgtttctcatccacggctatttatgcaaaaggat
gaagaaaaaacattaatcagtgctattactcacaattccgatttaaaaacagtagatctt
gccctgaaaaaatccggaaattcaataataaaccttccccttctggagcataaaaaaata
ggaaaaagactattacatatttccagagaagcattgagaagggtttttgttctttcttat
ttataccgtacaactaaagagcaaaagtattttgatgctgctgaaaaagaattgttacaa
ttgtcatcgtttacagattggaatcctactcattttctggatgtagcagaaatgacactc
gctgtatctataggctacgactggctgtatgataaattgtcgggcacctcgcgtgagaaa
atcagaactgctattatagaaaaaggattaaaaccttctctggacaaaaaatacaacagt
tggttaaaagtacaaaacaattggaatcaggtctgcaatgccggagtttctttaggtgct
atagctgtatatgaaaatgatccggcaatagcttctcaaattatttcacgtgcgatagaa
tctatcaaagttcctatgaaaagatatgagcctagcggaacttatcccgaaggttattct
tattgggcttacggaacgacatataatattgtatttctggatgcgttgaaaaaattaacc
aacaacgattttggcttaggacatgctcctggctttacggctacagcagaatacttccag
catttaatgggtacatccggactatctttcaattattccgacagcatgtcgtctccggaa
atgagttccgcaactttctggttcgctagaaatcttaataatccgtcactggtatggaac
gatcttcaatatataagaaatcctgataaagctaaacaactttcttctgatcgttttctt
cctcttattcctatatggggaaaagatatacaaaaactatcacctcaacgtccggaaaaa
ttattctgggccggagagggggataatcctgtagttatgatgcgtagcagctggacaagt
cctaaggcactatttctgggatacaaactaggatctcccagtgttgaacatggacatatg
gatgtaggttcttttgtttttgattctgatggcgtaagatgggctatggattttggacaa
caagagtatgaatcccttgaatctaaaaacattgatctctggagttatggacagaatgca
caacgttggacagtctttcgctacaacagtctgtctcataatatgcttacatttgacaac
gatcaacaatattcaaagggaaaagccacatttctaaaaaaatcagataataaaaatttc
agcttcgcaacctcagatctttccgatctgtacaaaaacaaagtccctaaggttgtccgg
ggtgtcgcactcaaagatcaggcctatgcacttgttcaggatgaagttcagacaggaagc
gcacctacaatagtacgctggagaatgctgactcctgccaatgctgaaattctttctcca
actgaaattttattaaaaaaagacaataagaaattactcttaaagatcaattctgccact
cctgttacacttaaaacatggagtaccgcaccaacaaattcttacgacgctcctaatccg
ggaactgtgcttgtaggatttgaaaccgaattgcccgctaatactaaaagtacttttgcc
gtacaactcattccaagaggtaaaatgaaaaaacgcttcgaaacgaaagtacaaccatta
gaagagtggaaataa
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