Elizabethkingia miricola: VO54_03615
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Entry
VO54_03615 CDS
T03757
Symbol
sbcD
Name
(GenBank) Nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
elb
Elizabethkingia miricola
Brite
KEGG Orthology (KO) [BR:
elb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
elb03400
]
VO54_03615 (sbcD)
DNA repair and recombination proteins [BR:
elb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VO54_03615 (sbcD)
Archaeal homologous recombinant proteins
VO54_03615 (sbcD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
AJW65042
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Position
complement(3865320..3866558)
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AA seq
412 aa
AA seq
DB search
MRILHTADWHIGQLFHEYDRSFEHQEFLNWLLNILVTEQIDILLISGDIFDLSNPSAASI
KMFYTFLNSAIKLNPELQIIVTAGNHDSASRLESPKPLLESSNIHIIGVVEKDENGLIDY
DKIIIPLKDKNGNINTWCIAAPFLRTGDYPIISDCDNPYTEGVATFYKEAYEFVNSKRQT
HQAIIAMGHLHAQQAEINKDDKERPIMGGVECISASAFNENICYVALGHIHKAQRIGSKD
HIRYCGSPLPMSFSEINYKHQVIVFEINEGQINNLKTLEIPISIPLLSVPTVHSSLEEVL
TALAQLKTAEDNLDLAPYLQVRVLLENPEPSLKYKVEAAIKGKYVRLASIDTCYKTKSSE
LKKSENISQIQLNELKPEDVLRKVYQNKYNNPIPDNLFKLFQQVTQEINEKE
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgagaattttacatactgctgattggcatatcggccaattatttcatgagtatgatcgc
tcttttgagcatcaagaatttttgaactggctattaaatatattagtaaccgagcagata
gatattttacttattagtggagacatatttgatttatcaaatccttctgcagcttcgata
aaaatgttttatacatttctgaacagcgctataaagctaaatccagaattacaaataata
gttactgcaggaaatcatgattcagcttcccgtttagaatcccctaagccactcttggaa
tcttctaatattcatatcataggagtagtagaaaaagatgaaaacggactaattgattat
gataaaataattattcctttaaaagataaaaatgggaatataaacacttggtgcatcgct
gctccattcctccgcactggagattatcctattatttcagattgtgataatccttatact
gaaggtgtggctacattttataaagaagcttatgaatttgtgaattcaaaaagacaaact
catcaagctattatcgcaatgggccatttacacgctcagcaagctgaaataaataaagat
gataaagaaaggccaattatgggtggagtggagtgtatttcagcatcagcatttaatgaa
aatatttgttatgttgcattaggacacatacataaagcgcaacgtattggtagtaaagac
catatccgttattgtggaagcccgttaccaatgtctttttctgaaattaactacaaacat
caggtaattgtatttgagataaatgaaggacaaataaataatctgaaaactctagaaata
cctatttcaattcctcttctaagcgttcctactgttcacagttctttagaagaagtgtta
actgccttagctcagttaaaaacggctgaagacaatcttgatttagctccttatttacaa
gttcgtgttcttctggaaaatcccgagcccagtcttaaatacaaggttgaagctgcaata
aaggggaaatatgtaaggttggcgagcattgacacttgttacaagaccaaatcttcagaa
ttaaaaaaatctgaaaatataagtcaaatacaacttaatgaattgaaaccagaagatgtg
ctgcgtaaagtttatcaaaacaaatataataacccaatacctgacaacttatttaaacta
tttcagcaagtcacacaggaaattaatgagaaagaataa
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