Elizabethkingia miricola: VO54_03732
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Entry
VO54_03732 CDS
T03757
Symbol
lcfB
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
elb
Elizabethkingia miricola
Pathway
elb00061
Fatty acid biosynthesis
elb00071
Fatty acid degradation
elb01100
Metabolic pathways
elb01212
Fatty acid metabolism
elb02024
Quorum sensing
elb04146
Peroxisome
Module
elb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
elb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
VO54_03732 (lcfB)
00071 Fatty acid degradation
VO54_03732 (lcfB)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
VO54_03732 (lcfB)
09145 Cellular community - prokaryotes
02024 Quorum sensing
VO54_03732 (lcfB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
elb01004
]
VO54_03732 (lcfB)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
elb04147
]
VO54_03732 (lcfB)
Enzymes [BR:
elb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
VO54_03732 (lcfB)
Lipid biosynthesis proteins [BR:
elb01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
VO54_03732 (lcfB)
Exosome [BR:
elb04147
]
Exosomal proteins
Exosomal proteins of breast milk
VO54_03732 (lcfB)
Exosomal proteins of breast cancer cells
VO54_03732 (lcfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AJW65158
LinkDB
All DBs
Position
3995663..3997186
Genome browser
AA seq
507 aa
AA seq
DB search
MLNLSILVEQSAKRNPEKPALSLGETTLSYRTFHDKVCQTANALVKKGIGYSDKVAVLCP
NIPQFPIIFFGILKTGATVVPLSIFLKPEEIAYHLSDSDSKMFLCFAGTPEMPAGKFGKE
GFDKTESCIDFISIGNMAENIQNFDDLIRNEETIFESYLTSSEDTAVIIYTSGTTGKPKG
AELSHINLFTNAETSTTIVRSSEFEAQLVVLPLFHIFGLTVMMLAGIRKSLYLILLPKFD
AKTVCQLITRFDIKIFAGVPSMYWALLNDEDTEENRNIIKQLRICISGGASLPIKIIDAF
ESRFGVPIIEGYGMSEGSPVVAFNQLTVGRKPGSIGTPVWGVEVRIVDDECNELPVGEKG
ELIYRGPNVMKAYYKKPEETNEVLKNGWMFSGDIAVKDEDGFFFIVDRKKEMIIRGGMNV
YPREVEEVMMRHSDISMVAVIGVSNEKLGEEIKAFVVKKKESKVSEEDIKLWIKERISRY
KYPRIIEFIDELPLNATGKILKKNLKN
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgctaaacttatcaattttggtagagcaaagtgcaaaaagaaatcctgaaaaaccagca
ttaagtcttggtgaaactaccttaagttatagaacttttcatgataaagtgtgtcagaca
gccaatgcccttgtaaaaaaaggaataggttatagtgataaagttgccgtgttatgccct
aatatccctcaatttccgattattttttttgggatcttaaaaaccggggcaacggttgtt
ccattgagtattttccttaaacccgaagaaatagcttatcacctttctgactccgatagc
aaaatgtttttatgttttgccggaactccagaaatgccagcaggaaaattcggaaaagaa
ggttttgataaaaccgagtcatgcatagattttatcagtatcggaaatatggcagaaaat
attcagaattttgatgatttaatcaggaatgaagaaacaatctttgaatcttaccttact
tcctcggaagatacagctgttattatttatacttctggaacaaccggaaaaccaaaagga
gcagagctttcacacattaatctttttactaacgcggaaaccagtaccacaatagtcaga
tcttctgaatttgaagctcagcttgtcgttttgccattatttcacatttttggactgaca
gtaatgatgcttgcaggaatccggaagtcactttaccttatcctattgccaaaatttgat
gcaaaaaccgtttgccagctcatcacccggtttgatatcaaaattttcgccggtgttcca
tccatgtattgggcacttctgaatgatgaagataccgaagaaaacagaaatattattaaa
cagttaaggatctgtatttccggaggtgcttctcttccgataaaaattattgatgcattt
gaaagccgcttcggtgttccgattattgaaggctacgggatgtctgaaggctctcctgta
gttgcattcaatcagctaaccgttggaagaaaaccaggttctatcggcactccggtctgg
ggagtggaggtaaggattgtagatgatgaatgtaatgaacttccggttggtgaaaaagga
gaattaatctatcgtggtcccaatgtgatgaaagcctattacaaaaagcctgaagaaact
aatgaagtgctgaagaatggatggatgttttccggagatattgccgtaaaggatgaagac
gggtttttctttattgttgaccgcaagaaagaaatgattatcagaggcgggatgaatgta
tatccccgtgaagttgaggaagtaatgatgagacattccgatatctctatggttgctgtt
atcggagtcagcaatgaaaaattaggtgaagaaataaaagcatttgtggtaaagaaaaaa
gaaagcaaagtttctgaagaagatatcaaactatggataaaagaaaggatttccaggtat
aaatacccgagaattatagaatttattgatgagctgcctttaaatgcaacaggaaaaata
cttaaaaagaatttaaaaaattaa
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