Elizabethkingia miricola: VO54_03794
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Entry
VO54_03794 CDS
T03757
Symbol
lpxC
Name
(GenBank) UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase
KO
K16363
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:
3.5.1.108
4.2.1.59
]
Organism
elb
Elizabethkingia miricola
Pathway
elb00061
Fatty acid biosynthesis
elb00540
Lipopolysaccharide biosynthesis
elb01100
Metabolic pathways
elb01212
Fatty acid metabolism
Module
elb_M00083
Fatty acid biosynthesis, elongation
Brite
KEGG Orthology (KO) [BR:
elb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
VO54_03794 (lpxC)
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
VO54_03794 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
elb01005
]
VO54_03794 (lpxC)
01004 Lipid biosynthesis proteins [BR:
elb01004
]
VO54_03794 (lpxC)
Enzymes [BR:
elb01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
VO54_03794 (lpxC)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.59 3-hydroxyacyl-[acyl-carrier-protein] dehydratase
VO54_03794 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
elb01005
]
Lipid A
VO54_03794 (lpxC)
Lipid biosynthesis proteins [BR:
elb01004
]
Fatty acid synthase
Component type
VO54_03794 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
FabA
ApeI-like
DUF2118
Motif
Other DBs
NCBI-ProteinID:
AJW65219
UniProt:
A0AAQ1SZC5
LinkDB
All DBs
Position
4071040..4072437
Genome browser
AA seq
465 aa
AA seq
DB search
MSDKQKTLKEEVTLSGIGLHTGKNVIMTLKPAKENTGFVFVRTDLEGHPTVEADVNYVTS
TERGTSLEKKGVSIHTSEHVLAALVGMDLDNVIIELDSSEPPILDGSSKYFIEAIESVGV
EEQELQRDYLVIKEVLNYVDPASGSEITIIPADNYEITCMVDFGTKVLGTQNASLKHISE
FKDEISSARTFSFLHELEMLLDHGLIKGGDISNAIVYVDKELTPETIEKLKFAFGKEDVS
IRPNGILDNVTLKYPNEAARHKLLDVIGDLALVGVKIKGKVIANKPGHFVNTQFAKKLNR
QYKLQKKKNVPDFDLKADPVYDINGIMRLLPHRPPFLLVDKILELSDSHVVGLKNVTMNE
PFFVGHFPKEPVMPGVLQVEALAQVGGILVLANVPDPENYSTYFIKMDNVKFKRKIVPGD
TVIFKIELMEPIRRGIVHMQGYGYVGDTVAIEAELMAQVAKNKTE
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataagcaaaagactttaaaagaagaagtaaccctttcgggaattggacttcat
accggaaagaatgtaatcatgacactgaaacctgcaaaagaaaatacaggttttgtgttt
gtacgtactgatctggaaggacatcctacagtagaagcagatgttaattatgttaccagt
acagaaagaggtacttcccttgaaaagaaaggagtaagcattcatacttccgagcacgtt
ttagcagctttggtaggtatggatcttgataatgttattatcgaactggatagttcagaa
cctcctattttagacggatcatccaaatactttatcgaagccattgaatctgttggcgta
gaagaacaggaactacaaagagattatcttgttattaaagaggtattgaattatgtagac
ccggcttcaggctcagagattacaataatccctgcagataactacgaaattacctgtatg
gtagacttcggaactaaagttttgggaactcagaatgcaagtctgaaacatatttctgaa
tttaaagatgaaatttccagcgcaagaacattcagcttcttacacgaattggaaatgctt
ttagatcacggattaattaaaggtggagatattagcaatgctatcgtatatgttgataaa
gaattgacgcctgaaactatagagaaattaaaatttgcttttggtaaggaagatgtttct
atcagaccaaatggtatattagataatgttacccttaaatatccaaacgaagcagcacgt
cacaaattactagatgttattggtgatcttgctttagtaggtgttaaaataaaaggtaaa
gttattgcgaacaaaccagggcactttgtaaatacacaatttgccaaaaaattaaacaga
caatataaattgcagaaaaagaaaaatgtgccggattttgatttgaaggcagatcctgtt
tatgatataaacgggattatgagacttcttcctcaccgtccgccattcttattagtagat
aaaatcttagaattatctgacagccacgtggtagggttgaaaaatgttaccatgaacgaa
cctttctttgtaggacattttcctaaagaaccagtaatgccgggcgtattacaagtagaa
gctttagcacaggtaggaggtattttagtcttggctaatgtaccagatccggaaaattac
tctacatatttcattaaaatggataatgtaaagttcaaaagaaaaattgttccaggagat
accgttattttcaagattgaattaatggaacctatcagaagaggaattgttcatatgcag
ggatatggctatgtaggagatactgtagctattgaagcagaactaatggcacaggtagca
aaaaataaaaccgaataa
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