Elizabethkingia miricola: VO54_03894
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Entry
VO54_03894 CDS
T03757
Symbol
lagD_3
Name
(GenBank) Lactococcin-G-processing and transport ATP-binding protein LagD
KO
K20344
ATP-binding cassette, subfamily C, bacteriocin exporter
Organism
elb
Elizabethkingia miricola
Pathway
elb02010
ABC transporters
elb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
elb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VO54_03894 (lagD_3)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VO54_03894 (lagD_3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
elb01002
]
VO54_03894 (lagD_3)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
elb02000
]
VO54_03894 (lagD_3)
Peptidases and inhibitors [BR:
elb01002
]
Cysteine peptidases
Family C39
VO54_03894 (lagD_3)
Transporters [BR:
elb02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
VO54_03894 (lagD_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
SMC_N
nSTAND3
AAA_21
Peptidase_C39_2
AAA_22
AAA_13
RsgA_GTPase
AAA_16
AAA_14
AAA
TsaE
Motif
Other DBs
NCBI-ProteinID:
AJW65319
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All DBs
Position
4168287..4170380
Genome browser
AA seq
697 aa
AA seq
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MKRNKHLSKTFILQKDQTDCGVGCLLSLMRYYGGNDTLENLREKSGTSKQGTTLLGLYQA
ANSIGFDAEGCEADINALVEHGEPLILHVIMNEKYEHYVVCYYYENNKFCIGDPARGIIY
WTQEELEQYWKTKSCLTLKPNTDFIKTEYTNKAKKEWFFSLLKKDQEAIYTIIVLGIVLT
LLGMSMSIFSQKLIDDILPQRKLKVLMLSIAFLGFLLFARIAIQGLRELYIIKQNKSFNE
RINYSFFSSLLHLPKMFFDTRKIGDFVARLNDTQRIQNVIKQLITATTVDILSVFISVGF
LFFYSWKLAVLCLILSPIIFYIIFSFNKRIIESQQEVMQAYSQNEANYIDSIRGIEVVKN
FSRQDIFLKRNQNIFSFFQSKIYELGRLNIRISLTSGLVLVAFLLLILAFSSYHVLNNSI
KIGELMAIIGISSSLLASITNLALVSIPIQEAKVAFDRMFEYSSIKPETLDGIVLDEINS
INIQGVDFRYNGRSKLLEDVSLVLEKGKIITLLGESGRGKTTLAEILQKNYKPEAGNIII
NGEYNLQEISLSSWRDLIGIVPQNIQLFNGSIVENIVLDEQINEERLNSLVTDFGFAEFV
SSLPQGWGTLVGEEGINLSGGQKQLLGWMRALYHNPEFLILDEPTSSLDKEARSFIYSLI
SKLKSKKVIFIISHYIEDLQDISDTIIILENKCITIK
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaaataaacatctttccaaaacttttattctccagaaggatcagactgattgt
ggtgttggctgtttattgtcacttatgcgctattacggaggtaatgatacattagaaaat
cttcgagagaaaagtggcaccagtaaacaaggcactacacttttagggctttatcaagct
gcaaattctattggttttgatgctgagggttgtgaagcagatataaatgcacttgtagag
catggggaacctctgattcttcatgttattatgaatgaaaaatatgaacattatgtggtt
tgttattattatgaaaataataagttttgtattggagatcctgctagggggataatctac
tggactcaagaagaacttgaacaatattggaagacaaaaagctgcctaactttaaagcct
aatactgattttataaagactgagtacactaataaagccaagaaagaatggtttttcagt
cttctgaaaaaagatcaggaagctatctatactattattgtgctaggaattgtactaacc
ttactgggtatgtcaatgtcgatattctctcaaaagcttattgatgatattcttcctcaa
agaaaattaaaggtattaatgttaagtatcgcatttttaggattcttattatttgcgaga
atagccatacagggtttgcgggaattgtatattattaaacagaataaatcctttaatgaa
aggattaattacagtttcttttcctctttactgcacttacctaaaatgttttttgatact
cgtaaaataggagattttgtggcaaggcttaatgatactcagagaatccaaaacgttatc
aaacaattaattactgctacaactgtagatatactgagtgtatttatatcggtaggtttt
ttattcttttattcatggaaattagcagtactatgtcttatactttctccaatcatcttt
tatattatatttagctttaataaaaggataatagagtcccaacaggaagttatgcaggcg
tatagccaaaatgaagctaattacatagacagcatacgaggaattgaggttgtaaagaac
ttctccagacaagatatatttctaaaaaggaatcaaaatatatttagcttctttcaatct
aaaatttatgaattagggagacttaatatacgtatttcccttacttctggactcgtttta
gttgcattcttgctattaatattagccttttcgtcttatcatgtacttaataacagtata
aaaataggtgaacttatggctattattggaatatcaagttcattattggcttctattact
aatttagccttggttagcattcctattcaggaagctaaagttgcatttgacagaatgttt
gagtattcatctataaaacccgaaacccttgatggcattgttttagatgaaatcaatagc
atcaatattcagggtgttgattttagatataatggtagaagcaaattgttagaagatgtt
tctcttgtattggagaaaggaaagattataactttattaggagagagtggaagaggtaaa
accactcttgcagaaatccttcagaagaattataagcctgaagcaggcaatatcattatc
aacggagaatataatctgcaagagatttcattatcttcatggagagatttgataggtatt
gttccacagaatattcaattatttaatggtagtattgttgagaatattgttttagatgaa
caaattaatgaagaaagattaaactccttagtgactgattttggttttgcagagttcgtc
tcttctttacctcaaggatggggaacattagtaggagaagagggaattaatctttcgggg
ggacaaaaacaattattaggatggatgcgtgctttatatcataatcctgaatttttgatt
ctagatgagcctacatcctccttagataaggaagctaggagctttatttacagcctgatt
agtaagttaaaatccaaaaaagtaatattcattattagccattatatagaggatttacaa
gacatctctgatactattataatattagaaaacaaatgtatcactataaaatag
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