Elizabethkingia miricola: VO54_03919
Help
Entry
VO54_03919 CDS
T03757
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
elb
Elizabethkingia miricola
Pathway
elb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
elb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VO54_03919 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
elb03400
]
VO54_03919 (alkA)
Enzymes [BR:
elb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
VO54_03919 (alkA)
DNA repair and recombination proteins [BR:
elb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VO54_03919 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NNH3
Motif
Other DBs
NCBI-ProteinID:
AJW65344
LinkDB
All DBs
Position
4194085..4194720
Genome browser
AA seq
211 aa
AA seq
DB search
MNISSTFTSENFRIICDELANNDNHLKEIVDAYGYPPMWTRDNSFETFVHIILEQQVSLA
SALATLNKLKEKLIDISPEKILTLTDEEMKACFVSRQKSAYIRGLAQALINEEVRLHELE
KITNEEIRDQLIKLKGIGNWTIDVYLMFVLQRTDLFPIGDLAAVNALKRLKKLESSVTRE
EIISISENWKPYRTIATMMLWHYYLSSARNK
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaatatatcttctacttttacttctgaaaacttccggataatttgtgatgagctggct
aataatgataatcatttgaaagagattgtggatgcatatggctatccgccaatgtggaca
agggataatagttttgaaacttttgttcatatcattttagaacagcaggtttctttagca
tcagcattggctactttaaataaactgaaagaaaagcttatagatatttctcccgaaaag
attcttacacttaccgatgaggaaatgaaagcctgctttgtaagccggcagaaatctgct
tacattagaggattagcccaggcgcttataaatgaagaggtgaggcttcatgaacttgaa
aaaataacaaatgaggaaatacgggatcagcttattaaactcaaaggtatcggaaattgg
acaatagatgtttatctcatgtttgtattgcagcgcacagacctttttcctattggtgat
ctggcagcggtaaatgcactaaaacgtctaaagaagctcgaatcttctgttacaagagaa
gaaataataagtattagtgaaaactggaaaccttaccgtactatagctactatgatgctt
tggcattactatttgtccagtgcaagaaataagtaa
DBGET
integrated database retrieval system
