Escherichia coli clone D i14: i14_0955
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Entry
i14_0955 CDS
T02003
Symbol
ycaO
Name
(GenBank) hypothetical protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
elc
Escherichia coli clone D i14
Brite
KEGG Orthology (KO) [BR:
elc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
elc03009
]
i14_0955 (ycaO)
Ribosome biogenesis [BR:
elc03009
]
Prokaryotic type
ribosomal protein modification factors
i14_0955 (ycaO)
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Paralog
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GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
AER88459
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All DBs
Position
complement(972464..974257)
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AA seq
597 aa
AA seq
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MCAFRTTKVIFMTQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVWSVHIR
DKECALCFTNGKGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVHYPNEKWF
PLTENDDVPEGLLDDRLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTRQSDNQTIYI
PMNIIGNLYVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPADVLARYPA
VVEAIETLEAEGFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVT
ELLQGRGLKDLDVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLFKQDADYPFVDWSFS
GTTEEEFATLMAIFKKEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWLANNSMGSH
LRETILSLPGSEWEKEDYLNLIEQLDEEGFDDFTRVRELLGLATGSDNGWYTLRIGELKA
MLALAGGDLEQALVWTEWTMEFNSSVFSPERANYYRCLQTLLLLAQEEDRQPLQYLNAFV
RMYGADAVEAASAAMSGEAAFYGLQPVDSDLHAFAAHQSLLKAYEKLQRAKAAFWAK
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
ttgtgcgctttccgtacgactaaagtgattttcatgacgcaaacatttatccccggcaaa
gatgccgctctggaagattccatcgcacgcttccagcaaaaactttcagacctcggtttt
cagattgaagaggcctcctggctgaatccggtgcctaacgtctggtctgtacatattcgc
gacaaagagtgcgcactgtgttttaccaacggtaaaggcgcaaccaaaaaagcggcgctg
gcttctgccctcggtgaatatttcgagcgtctctcaaccaactacttttttgcggacttc
tggctgggcgaaaccatcgccaacggcccattcgtgcattatcccaacgaaaaatggttc
ccactgaccgaaaatgacgatgtaccagaagggctgctcgatgaccgtctgcgcgcattt
tacgatccggagaatgaactgaccggtagtatgctgattgacctgcaatccggtaacgaa
gatcgtggtatttgcggtctaccgtttacgcgccagtccgacaatcagaccatttatatt
ccgatgaatatcattggtaacttgtacgtttctaacggtatgtctgctggcaatacccgt
aacgaagcacgcgttcaggggttgtccgaagttttcgaacgttacgtgaaaaaccgcatt
attgctgaaagcatcagcttgccggaaatcccggcagacgtgctggcacgttatccagca
gtagttgaagcgatcgaaacgctggaagcggaaggtttcccgatcttcgcttatgacggt
tcgcttggcggccagtatccggtgatttgcgtggtactgttcaatcctgctaacggtacc
tgctttgcctcattcggtgcgcatcctgattttggcgttgcactggaacgtaccgtgacc
gagctgctgcaaggtcgtggcctgaaagatctggatgtgtttactccaccaaccttcgat
gatgaagaagtcgctgaacataccaacctcgaaacgcactttatcgattccagcggttta
atctcctgggacctgttcaagcaggatgccgattatccgtttgttgactggagcttctcc
ggcaccacggaagaagagttcgccacgctgatggctatcttcaaaaaggaagataaagaa
gtttatattgccgattacgagcatctgggtgtctacgcttgccgtattatcgtgcctggc
atgtccgatatttatccggctgaagatctgtggctggcgaataacagtatgggcagccat
ttacgtgaaacgattctttcgctaccaggtagcgagtgggaaaaggaagattacctgaac
ctcatcgagcaactggatgaagaaggttttgatgactttacccgcgtgcgtgaactgttg
ggtctggcgaccgggtcggataacggctggtacactctgcgtatcggtgaattaaaagcc
atgctggcgctggctggtggcgatctggaacaggctctggtctggaccgaatggacgatg
gagtttaactcatcagtattcagcccggaacgcgccaattattatcgctgcctgcaaacg
ttgttattactggcgcaggaagaagatcgccagccgctgcaatatctgaatgcgtttgtt
cgcatgtacggcgcagatgccgtggaagccgccagtgcggcaatgagcggcgaagcggcg
ttttatggcttgcaaccagtagatagcgatctgcacgcgtttgctgcacatcagtcgttg
ttgaaggcctacgaaaagctgcaacgcgccaaagcagcattctgggcaaaataa
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