Escherichia coli clone D i14: i14_1050
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Entry
i14_1050 CDS
T02003
Symbol
ycdC
Name
(GenBank) putative transcriptional regulator YcdC
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
elc
Escherichia coli clone D i14
Brite
KEGG Orthology (KO) [BR:
elc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
elc03000
]
i14_1050 (ycdC)
Transcription factors [BR:
elc03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
i14_1050 (ycdC)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
TetR_C_29
Motif
Other DBs
NCBI-ProteinID:
AER88554
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Position
1074341..1075006
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AA seq
221 aa
AA seq
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MPINKRGERMTQGAVKTTGKRSRAVSAKKKAILSAALDTFSQFGFHGTRLEQIAELAGVS
KTNLLYYFPSKEALYIAVLRQILDIWLAPLKAFREDFAPLAAIKEYIRLKLEVSRDYPQA
SRLFCMEMLAGAPLLMDELTGDLKALIDEKSALIAGWVKSGKLAPIDPQHLIFMIWASTQ
HYADFAPQVEAVTGATLRDEVFFNQTVENVQRIIIEGIRPR
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
ttgccaatcaacaagaggggagagcgcatgacgcaaggcgcagtgaaaacaacgggtaag
cgttcgcgcgcagtaagcgcgaagaaaaaagcgattcttagcgcagcactggacactttt
tcacaattcggttttcacggcacaaggctggagcagatcgcggagttggcgggtgtttca
aaaaccaatctgctgtattactttccgtcaaaagaggcgctgtatatagccgtactgcgg
cagattctcgatatctggctggcaccgttaaaagcgtttcgagaagatttcgccccgctg
gcggcgatcaaagaatacatccgtctgaagctggaagtttcccgcgattatccgcaggct
tcgcgcctgttctgtatggagatgctggcaggtgcaccgctgttaatggatgaactgacg
ggcgatttgaaggcattaattgatgagaaatcggcgctcattgccggttgggttaaaagc
ggcaaactcgcgccgattgacccgcagcatttgatttttatgatttgggcttccactcaa
cattacgccgattttgcccctcaggtggaggcggtgacaggcgcgacgttgcgcgatgag
gtgtttttcaatcaaacggttgaaaacgtgcagcggattattattgaggggattcgacca
cgttaa
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