Escherichia coli clone D i14: i14_1268
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Entry
i14_1268 CDS
T02003
Symbol
ycfS
Name
(GenBank) hypothetical protein
KO
K19236
L,D-transpeptidase YcfS
Organism
elc
Escherichia coli clone D i14
Pathway
elc01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
elc00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
i14_1268 (ycfS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
elc01002
]
i14_1268 (ycfS)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
elc01011
]
i14_1268 (ycfS)
Peptidases and inhibitors [BR:
elc01002
]
Cysteine peptidases
Family C82
i14_1268 (ycfS)
Peptidoglycan biosynthesis and degradation proteins [BR:
elc01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
i14_1268 (ycfS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
LysM
DUF6518
Motif
Other DBs
NCBI-ProteinID:
AER88768
LinkDB
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Position
complement(1275109..1276242)
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AA seq
377 aa
AA seq
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MNWKRTRSLDGKSGASLRPHLQYLQILCTSLHYPTLSPSIIQTYFFITITLYLLLTLVMI
KTRFSRWLTFFTFAAAVALALPAKANTWPLPSADSRLVGENKFHVVENDGGSLEAIAKKY
NVGFLALLQANPGVDPYVPRAGSVLTIPLQTLLPDAPREGIVINIAELRLYYYPPGKNSV
TVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTPTANIRARYKAQGIELPAVVPAGPDNP
MGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCIRLRDDDIKTLFSQVTPGTKVNIINT
PIKISAEPNGARLVEVHQPLSEKIDDDPQLLPITLNSAMQSFKDAAQTDAEVMQHVMDVR
SGMPVDVRRHQVSPQTL
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
gtgaactggaagagaacgcgatcgcttgatggtaaatcgggggcgtctctgcgcccccat
ctgcaatatttacaaattctttgcacttccctgcattatccgacactgtcaccctccata
attcagacttacttttttattacaataaccttatatttattattgactttggtgatgatc
aaaacgcgtttttctcgctggctaacgttttttacgttcgccgctgccgtggcgctggcg
ctaccggcaaaagccaacacctggccgctgccgtcagcggacagtcgtctggttggtgaa
aacaaatttcatgtggtggaaaatgacggtggttctctggaagcgatcgccaaaaaatat
aacgtcggctttctcgctctgttacaggctaaccccggcgttgatccttacgtaccgcgc
gcgggtagcgtgttaacgatcccgttgcaaaccctacttccagacgcgccgcgcgaaggc
attgtgatcaacattgcggagctgcgtctctattattatccgccgggaaaaaattcggta
accgtatatcccatcggcattggtcagttaggtggtgacacgctgacaccgacaatggtg
accactgtttctgacaagcgtgcaaacccaacctggacgccaacggcaaacattcgcgcg
cggtataaggcacagggaattgagttgcctgcggtagttccggctggaccggataaccca
atgggccatcatgcgattcgtctggcggcctatggcggcgtttatttgcttcacggtacg
aacgctgatttcggcattggcatgcgggtaagttctggctgtattcgtctgcgggatgac
gatatcaaaacactctttagccaggtcaccccaggcaccaaagtgaatatcatcaacacc
ccgattaaaatctctgccgaaccaaacggtgcgcgtctggttgaagtacatcagccgctg
tcagagaagattgatgacgatccgcagctgctgccaattacgctgaatagcgcaatgcaa
tcatttaaagatgcagcacaaactgacgctgaagtgatgcaacatgtgatggatgtccgt
tccgggatgccggtggatgtccgccgtcatcaagtgagcccacaaactctgtaa
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