Escherichia coli clone D i14: i14_1690
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Entry
i14_1690 CDS
T02003
Symbol
ydcU
Name
(GenBank) ABC transporter permease
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
elc
Escherichia coli clone D i14
Pathway
elc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
elc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
i14_1690 (ydcU)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
elc02000
]
i14_1690 (ydcU)
Transporters [BR:
elc02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
i14_1690 (ydcU)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
AER89181
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Position
1647543..1648484
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AA seq
313 aa
AA seq
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MAMNVLQSPSRPGLGKVSGFFWRNPGLGLFLLLLGPLMWFGIVYFGSLLTLLWQGFYTFD
DFTMSVTPELTLANIRALFNPANYDIIVRTLTMAVAVTIASAILAFPMAWYMARYTSGKM
KAFFYIAVMLPMWASYIVKAYAWTLLLAKDGVAQWFLQHLGLEPLLTAFLTLPAVGGNTL
STSGLGRFLVFLYIWLPFMILPVQAALERLPPSLLQASADLGARPRQTFRYVVLPLAIPG
IAAGSIFTFSLTLGDFIVPQLVGPPGYFIGNMVYSQQGAIGNMPMAAAFTLVPIVLIALY
LAFVKRLGAFDAL
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgaacgtattgcaatcaccttcacgtccaggtctgggtaaggtgtccggtttc
ttctggcgtaatccggggctggggctgtttttgctgctgcttggcccgctaatgtggttt
ggcattgtctatttcggctcgctgctgacgctgttatggcagggcttttatacctttgac
gatttcaccatgtcggtaacgccggaactgacgctggcgaatatccgtgcgctgtttaat
ccggcgaattacgacatcattgtccgcacgctgaccatggctgtggcagtcactatcgcc
agcgccattctggcttttccaatggcgtggtatatggcgcgctataccagcggaaaaatg
aaagcgtttttttatattgcggtaatgttgccgatgtgggcgagctacattgttaaagcc
tatgcctggacgttattgctggcaaaagatggcgtggctcagtggtttttacaacatctt
gggctggaaccactgctgactgcgttcctcacgctaccggcggtgggaggtaatacgctg
tcaacttccgggctggggcgctttctggtgtttctctatatctggctgccgttcatgatc
ctgcccgtgcaggcggcgcttgagcgtttgccgccgtcattgttgcaggcgtcggctgat
cttggcgcacgtccacgacaaacctttcgctatgtggtgttgccgctggcaatcccgggt
attgccgctggctctatctttaccttctcactcacgctgggcgattttattgtcccgcag
ctggttggccctccaggatattttatcggcaatatggtttattcccagcagggggcgatt
ggcaatatgccgatggcggcggcattcaccctggtgccgattgttctcatcgcactttac
ctggcgttcgtgaaacgtctgggagcgttcgatgcactctga
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