Escherichia coli clone D i14: i14_1969
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Entry
i14_1969 CDS
T02003
Symbol
xthA
Name
(GenBank) exonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
elc
Escherichia coli clone D i14
Pathway
elc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
elc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
i14_1969 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
elc03400
]
i14_1969 (xthA)
Enzymes [BR:
elc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
i14_1969 (xthA)
DNA repair and recombination proteins [BR:
elc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
i14_1969 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AER89458
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Position
1928706..1929524
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AA seq
272 aa
AA seq
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MAATMKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFY
HGQKGHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSPLGNVTVINGYFPQGESR
DHPIKFSAKAQFYQNLQNYLETELKRENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGK
CSFLPEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQP
LAECCVETGIDYEIRSMEKPSDHAPVWATFRR
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgactatgaaatttgtctcttttaatatcaacggcctgcgcgccagacctcac
cagcttgaagccatcgtcgaaaagcaccaaccggatgtgattggcctgcaggagacaaaa
gttcatgacgatatgtttccgctcgaagaggtggcgaagctcggctacaacgtgttttat
cacgggcagaaaggccattatggcgtggcgctgctgaccaaagagacgccgattgccgtg
cgtcgcggctttcctggtgacgacgaagaagcgcaacggcggattattatggcggaaatc
ccctcgccgctgggcaatgtcaccgtgatcaacggttacttcccgcagggtgaaagccgc
gaccatccgataaaattctcggcaaaggcgcagttttatcagaatctgcaaaactacctg
gaaaccgaactcaagcgtgaaaatccggtgctgattatgggcgatatgaatatcagtcct
ggcgacctggatattggcattggcgaagagaaccgtaagcgctggctgcgtaccggaaaa
tgttctttccttccggaggaacgcgaatggatggagaggctgatgagctgggggttggtc
gataccttccgccatgcgaatccgcaaacagcagatcgtttctcatggtttgattaccgc
tcaaaaggttttgacgataatcgcggtctgcgcatcgacctgctgctcgccagccaaccg
ctggcagaatgttgcgtagaaaccggcatcgactatgaaattcgcagcatggaaaaaccg
tccgatcacgcccccgtctgggcgaccttccgccgctaa
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