Escherichia coli clone D i14: i14_2187
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Entry
i14_2187 CDS
T02003
Symbol
yedQ
Name
(GenBank) hypothetical protein
KO
K21085
diguanylate cyclase [EC:
2.7.7.65
]
Organism
elc
Escherichia coli clone D i14
Pathway
elc02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
elc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
i14_2187 (yedQ)
Enzymes [BR:
elc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
i14_2187 (yedQ)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHASE7
GGDEF
MCP-like_PDC_1
RRM_2
UDPGP
Motif
Other DBs
NCBI-ProteinID:
AER89672
LinkDB
All DBs
Position
complement(2119828..2121537)
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AA seq
569 aa
AA seq
DB search
MGVVRVQHETKMENQSWLKKLARRLGPGHIVNLCFIVVLLFSTLLTWREVVVLEDAYISS
QRNHLENVANALDKHLQYNVDKLIFLRNGMREALVAPLDFTSLRNAVTEFEQHRDEHAWQ
IELNRRRTLPVNGVSDALVSEGNLLSRENESLDNEITAALEVGYLLRLAHNSSSMVEQAV
YVSRAGFYVSTLPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTE
PQVTVSVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPD
HPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDF
GSISIALTLLWALFTSMLLLSWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEK
ACPLAKLCHTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDIAGR
VGGEEFCVILPGANLTQAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYD
FEQLQSLADRRLYLAKQAGRNRVFASDNA
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
ttgggagtcgtcagggtgcagcacgagacaaaaatggaaaaccagagctggttgaaaaaa
ctcgcacgccgcctggggcctggtcatatcgttaatctctgctttatcgtggtattgctt
ttttccaccttgctcacctggcgtgaagtggtggtgctggaagatgcctatatatccagc
cagcgtaatcatctggaaaacgtagccaacgcgctcgataagcatttgcagtataacgtc
gacaaactgatctttttgcgtaatggcatgcgcgaagctctcgtggcgccactggatttc
acctctctgcgtaatgccgtaaccgagttcgaacagcatcgcgacgagcacgcctggcaa
atcgaactcaaccgacggcgcaccctgccagtcaatggcgtatcggatgcattagtcagc
gaggggaatctcctgtctcgcgaaaatgaaagcctcgacaatgaaattaccgctgcactg
gaagttggttacttgctgcgactggcgcacaactcctcgtcgatggttgaacaggctgtg
tatgtctcgcgtgctggattttacgtttcgacgctgccgaccttgtttacgcgcaatgta
ccaacgcgttattacggctatgtcacccaaccctggtttatcggccattcacaacgagaa
aatcgtcaccgcgcggtacgctggttcacttcgcaaccggaacacgccagcaatactgaa
ccgcaggttaccgtcagtgttccggtagacagtaataactactggtatggcgtgctgggg
atgagtattcccgtgcgtactatgcagcaatttttaagaaacgccatcgataaaaacctc
gatggtgagtatcagctctatgacagtaagctgagatttttgacctcttcaaatcctgac
catccaacagggaatatttttgatcctcgtgaactggccttgctggcgcaggcaatggaa
catgacacgcggggcggcattcgtatggacagtcgctatgttagctgggaacgtctggac
catttcgacggtgtgctggtgcgcgtccatacgctaagcgaaggcgtgcgcggcgatttc
ggcagtatcagcattgcattaaccctgctgtgggcgctctttaccagcatgttactcctc
tcctggtatgtgattcgccggatggtcagcaacatgtatgttctgcaaagctcgttgcag
tggcaggcgtggcacgacaccttaacgcgtttatataaccgtggcgcattgttcgaaaaa
gcctgtccgctcgctaaattgtgtcacacgcaccaacatcctttttctgtcattcaggtc
gatcttgaccattttaaagcgattaatgaccgctttggtcatcaggcgggcgaccgtgtt
ctttctcatgctgccggattaattagcagttccttgcgtgcgcaggacattgccgggcgg
gtcggtggtgaggagttttgtgtgattctgccaggcgcgaatctgacgcaggctgcggag
gtcgcagaacgtattcgcctgaagttaaatgaaaaagagatgctgatcgccaagagtaca
acgatacgcattagtgcctcgctgggggtaagcagcagcgaggaaaccggtgattatgat
tttgaacaactccagtcattggccgaccgtcggctttacctcgcaaaacaggccgggcgc
aatcgggtattcgcgagcgataacgcttaa
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