Escherichia coli clone D i14: i14_3113 Help Entry i14_3113          CDS       T02003                                  Name (GenBank) ClpB protein   KO K11907   type VI secretion system protein VasG Organism elc  Escherichia coli clone D i14 Pathway elc03070   Bacterial secretion system Brite KEGG Orthology (KO) [BR:elc00001]  09130 Environmental Information Processing   09131 Membrane transport    03070 Bacterial secretion system     i14_3113  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02044 Secretion system [BR:elc02044]     i14_3113 Secretion system [BR:elc02044]  Type VI secretion system   Imp/Vas secretion system core components    i14_3113 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_5 AAA_22 AAA_16 AAA_25 nSTAND3 ATPase_2 AAA_24 Clp_N AAA_7 NACHT AAA_14 IstB_IS21 Zeta_toxin Sigma54_activat bpMoxR T2SSE TniB NBD_SMAX1 DUF815 AAA_11 AAA_6 Motif Other DBs NCBI-ProteinID:  AER90575 LinkDB All DBs Position 3118081..3120717 Genome browser AA seq 878 aa AA seqDB search MTGNHPAALLRRLNPYCARALDAAASLCQTRAHAEITIEHWLLKLLEQGEGDITVIARRY EWDIDTLWQSLLAHLDTLPRPVRERPQLSEPLAALIRQAWLIASLEGDDPQIRSQHLLMA LTEKPMLPACNDLWVLLSLSRVQLERLRPLLDAQSDECPARQPQVTEPLTSALPETATAD APAKTLTEKQDDALLAVLNRFTEDVTEKARSGRIDPVFGRDTEIRQMVDILSRRRKNNPI LVGEPGVGKTALVEGLALRITEGNVPDSLKTVHIRTLDLGLLQAGAGVKGEFEQRLKNVI DAVQKSPEPVLLFIDEAHTIIGAGNQAGGADAANLLKPALARGELRTIAATTWSEYKQYF ERDAALERRFQMVKVDEPDDDTACLMLRGLKARYAQHHGVHMLDSAIQTAVRLSRRYLTG RQLPDKAVDLLDTAGARVRMSLDTLPEPLTQLHVRLAALDIEREAIEQDSVFYPEASPER LAELTDLRDELQAEAGHLEAQYQQEKALAQQIMTLRQEGTDSTELQQQLRTHQGFAPLLA LDVDARAVATVVADWTGIPLSSLLKDEQSDLLSMEQSLENRVVGQSPALCAIAQRLRAAK TGLTPENGPQGVFLLTGPSGTGKTETALTLADTLFGGEKSLITINLSEYQEPHTVSQLKG SPPGYVGYGQGGVLTEAVRKRPYSVVLLDEVEKAHRDVMNLFYQVFDRGFMRDGEGREID FRNTVILMTANLGSDHIMQLLEEKPDATDADLHELLYPLLREHFQPALMARFQTVIYRPL GQEAMRAIVEMKLAQVARRLHQHYGLETEISNSLYDALTAACLLPDTGARNIDSLLNQQI LPVLSQQLLAQQAVHHKPARLRLDWDDEDGIVLEFDEK NT seq 2637 nt NT seq  +upstreamnt  +downstreamnt atgacaggaaatcaccccgccgcgctgctgcgtcgccttaacccatactgtgcacgggcg ctggacgctgccgcctcactgtgtcagacccgcgcccatgcggaaataaccattgaacac tggctgctgaaactgctggagcagggagaaggcgatatcacggtgattgcccgccgctat gaatgggatatcgacacgctctggcagtctctgctggcacatctggacaccttaccccgc ccggtccgcgaacgtcctcaactttctgaaccgctggcagcgcttatccgacaggcgtgg ctgatagcgtcactggaaggcgacgatccacaaatccgcagccagcatctgctgatggcg ctgacagaaaaaccgatgctgcccgcctgtaatgacctgtgggtattgctgagtctgagc cgcgtgcagcttgagcggctgcgtcccctgctggatgcgcagtcggatgaatgtccggca cgtcagccacaggtcaccgaaccgctgacctctgcactgccggagacggcaacggcggac gcaccggcaaaaacgctgacggagaaacaggatgacgccctgctggcggtgcttaaccgc tttaccgaagacgtgacggaaaaagcccgcagcgggcgaatcgacccggtattcgggcgc gacacggaaattcgccagatggtcgatatcctctcccgtcgccgcaaaaacaacccgatt ctggtgggagaaccgggggtgggcaaaaccgcgctggtggaagggctggcgctgcgtatc accgaaggcaacgtgccggacagcctgaaaacggtgcatatccgcacactggacctcggt ctgttacaggctggcgcgggcgttaaaggtgaatttgaacagcggctgaaaaatgtcatc gatgcagtgcagaaatcaccggagccggtactgctgtttattgatgaagcccataccatt atcggtgcgggtaatcaggcaggcggcgcggatgcggcgaacctgctgaaaccggcactg gcaaggggcgaactgcgcaccatcgcggcgaccacgtggagcgaatacaaacagtatttt gagcgcgacgccgcgctggagcgccgcttccagatggttaaggttgacgagccggatgat gacaccgcctgcctgatgctcagggggctgaaagcccgctatgcgcagcaccacggcgta catatgctggacagcgccattcagaccgccgtgcgcctgtcgcgccgctatctgaccgga cgccagttgccggacaaggcggttgatttgctggataccgccggggcaagagtccgcatg agccttgacaccctgccggaaccgttgacgcagcttcatgtgcgactggcggcactggat attgagcgggaagcgattgagcaggacagcgtattttatcccgaagccagcccggagcgg ctggcggaactgaccgatttgcgtgatgagctacaggcagaagccgggcatctggaagcg cagtatcagcaggaaaaggcactggcgcagcagattatgacgttgcgtcaggaagggaca gacagcactgaactgcaacagcaactgcgaacgcatcagggctttgcaccgctgctggcg ctggatgtggacgcccgcgccgtcgccacggtggtggcggactggaccggcatcccgcta tcttccctgctcaaggacgagcagagcgacctgctcagtatggaacagagtcttgaaaac cgcgttgtcgggcaaagcccggcgctctgcgccatcgcacagcggctgcgggcggctaag accggcctcacgccggagaacggcccgcagggggtattcctgctgaccggccccagcggc accggtaaaaccgaaactgcgctcacactggccgacactctgtttggcggtgaaaaatcc cttatcaccatcaacctctccgaatatcaggagccgcataccgtctcccagcttaagggg tctcctccgggctacgttggctacggtcagggtggcgtactcaccgaagccgttcgcaaa cgcccttacagcgtggtgctgctcgacgaagtggaaaaggcgcaccgcgacgtaatgaac ctgttctatcaggtatttgaccggggctttatgcgcgacggcgaaggccgggaaattgac ttccgcaacaccgtgattctgatgacggctaatctgggcagcgaccacatcatgcaactg ctggaggaaaaaccggacgccacggacgcagacctgcatgaactgctgtatcccctgctg cgcgagcacttccagccagcactgatggcgcgttttcagacggtgatttaccgcccgctg ggacaggaggcgatgcgcgccattgtggaaatgaaactggcgcaggtggcccgccgtctt caccagcactatgggctggaaacggaaatcagtaacagcctgtacgacgccctgaccgcc gcctgcctgctgccggacaccggtgcgcgtaatatcgacagcctgctgaaccagcaaatc ctgccggtcttaagccagcagttgctggcgcagcaggccgtgcatcataagcctgcccga ctgcggcttgactgggatgatgaagacgggattgtgctggaatttgatgagaaataa

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