Escherichia coli clone D i14: i14_3516
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Entry
i14_3516 CDS
T02003
Symbol
ygjF
Name
(GenBank) G/U mismatch-specific DNA glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
elc
Escherichia coli clone D i14
Pathway
elc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
elc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
i14_3516 (ygjF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
elc03400
]
i14_3516 (ygjF)
Enzymes [BR:
elc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
i14_3516 (ygjF)
DNA repair and recombination proteins [BR:
elc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
i14_3516 (ygjF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AER90971
LinkDB
All DBs
Position
complement(3526379..3526885)
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AA seq
168 aa
AA seq
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MVEDILAPGLRVVFCGINPGLSSAGTGFPFAHPANRFWKVIYQAGFTDRQLKPQEAQHLL
DYRCGVTKLVDRPTVQANEVSKQELHAGGRKLIEKIEDYQPQALAILGKQAYEQGFSQRG
AQWGKQTLTIGSTQIWVLPNPSGLSRVSLEKLVEAYRELDQALVVRGR
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atggttgaggatattttggctccagggttacgggtcgtgttttgcggtatcaaccctggt
ctttcatccgccggaacgggttttccctttgctcatccggcaaaccgcttctggaaggtg
atatatcaggccgggtttaccgaccgtcagttgaagccgcaggaggcacagcatctgctg
gattatcgttgtggcgtcaccaaactggtagaccgtccaacggtgcaagccaatgaagtg
tcaaagcaggaactgcacgcaggcgggcgtaagctaattgaaaaaatagaagattatcag
ccgcaggcgttggcgattctgggcaaacaagcatatgaacagggattcagccagcgcggt
gcacagtgggggaaacaaactctcaccattggttcgacgcagatttgggtgctgccaaat
cccagcggtttaagtcgcgtttcactggagaaactggttgaagcgtatcgcgagctggac
caggcgctggtggtgcgtgggcgataa
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