Escherichia coli clone D i14: i14_3725
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Entry
i14_3725 CDS
T02003
Symbol
yrdC
Name
(GenBank) putative ribosome maturation factor
KO
K07566
L-threonylcarbamoyladenylate synthase [EC:
2.7.7.87
]
Organism
elc
Escherichia coli clone D i14
Brite
KEGG Orthology (KO) [BR:
elc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
elc03009
]
i14_3725 (yrdC)
03016 Transfer RNA biogenesis [BR:
elc03016
]
i14_3725 (yrdC)
Enzymes [BR:
elc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.87 L-threonylcarbamoyladenylate synthase
i14_3725 (yrdC)
Ribosome biogenesis [BR:
elc03009
]
Prokaryotic type
Other maturation factors
i14_3725 (yrdC)
Transfer RNA biogenesis [BR:
elc03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
i14_3725 (yrdC)
Prokaryotic type
i14_3725 (yrdC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sua5_yciO_yrdC
Motif
Other DBs
NCBI-ProteinID:
AER91177
LinkDB
All DBs
Position
complement(3733268..3733885)
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AA seq
205 aa
AA seq
DB search
MPVNNVESRFRRNNNVNNNLQGDAIAAAIDVLNEERVIAYPTEAVFGVGCDPDSETAVMR
LLELKRRPVDKGLILIAANYEQLKPYIDDTMLTDAQRETIFSRWPGPVTFVFPAPATTPR
WLTGRFDSLAVRVTDHPLVVALCQAYGKPLVSTSANLSGLPPCRTVDEVRAQFGAAFPVV
PGETGGRLNPSEIRDALTGELFRQG
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
gtgccagtaaacaatgtggaaagccgatttcggcggaataataacgtgaataataacctg
caaggagacgctatcgcagctgcgatagatgtcctcaatgaagaacgtgtcatcgcctat
ccaacggaagccgttttcggtgtcgggtgcgatcctgatagcgaaacagcagtgatgaga
ctgttggagttaaaacggcgtccggttgataaggggctgattttaatcgcggcaaattac
gagcagcttaaaccctatattgatgacaccatgctgactgacgcgcagcgtgaaaccatt
ttttcccgctggccaggtcctgtcacctttgtctttcccgcgcctgcgacaacaccgcgc
tggttgacgggccgctttgattcgcttgctgtacgagtcaccgaccatccgttggtggtt
gctttgtgccaggcttatggtaaaccgctggtttctaccagtgccaacttgagtggattg
ccaccttgtcgaacagtagacgaagttcgcgcacaatttggcgctgcgttcccggttgtg
cctggtgaaacgggggggcgtttaaatccttcagaaatccgcgatgccctgacgggtgaa
ctgtttcgacaggggtaa
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