Escherichia coli clone D i14: i14_4107
Help
Entry
i14_4107 CDS
T02003
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-mannoheptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
elc
Escherichia coli clone D i14
Pathway
elc00541
Biosynthesis of various nucleotide sugars
elc01100
Metabolic pathways
elc01250
Biosynthesis of nucleotide sugars
Module
elc_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
elc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
i14_4107 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
elc01005
]
i14_4107 (rfaD)
Enzymes [BR:
elc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
i14_4107 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
elc01005
]
Core region
i14_4107 (rfaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
adh_short
Motif
Other DBs
NCBI-ProteinID:
AER91552
LinkDB
All DBs
Position
4098002..4098934
Genome browser
AA seq
310 aa
AA seq
DB search
MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLDIADYMDKEDFLIQI
MAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATY
GGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGS
MASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGVSGIFNLGTGRA
ESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVT
EYMAWLNRDA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgttaccggcggcgcgggctttatcggaagcaacatcgttaaagccctgaat
gataaaggcatcaccgatattctggtggtggacaacctgaaagacggcaccaagtttgtg
aacctggtggatctggatatcgcggactatatggataaggaagacttcctgatccagatt
atggctggcgaagagttcggcgatgtcgaagcgattttccacgaaggcgcgtgctcttcc
accaccgagtgggacggcaagtatatgatggataacaactatcaatactccaaagagctg
ctgcactactgtctggagcgcgaaatcccgttcctgtatgcctcttccgcagccacttac
ggtggacgcacctccgactttattgaatcccgcgaatatgaaaaaccgttgaatgtctac
ggttactcaaaattcctgtttgatgaatatgttcgccaaatcctgcctgaagcgaactca
cagattgttggcttccgttatttcaacgtttatggaccgcgtgaaggccataaaggcagc
atggcgagcgtcgctttccatctcaacacccagcttaataacggtgaatcaccgaagctg
ttcgaaggtagcgagaacttcaaacgtgacttcgtctatgtgggcgatgtggcagatgta
aacctgtggttcctggaaaatggcgtttccggcatcttcaacctcggcaccggtcgtgcg
gaatccttccaggcagtagcagatgctacgcttgcttatcacaagaaaggccagatcgaa
tacattccgttcccggataaactgaaaggccgctaccaggcgttcactcaggcagatctg
acgaatctgcgcgcggcgggttacgataaaccgttcaaaaccgttgccgaaggcgtaacg
gaatacatggcctggctgaatcgtgacgcataa
DBGET
integrated database retrieval system
