Escherichia coli clone D i2: i02_0161
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Entry
i02_0161 CDS
T02004
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
eld
Escherichia coli clone D i2
Pathway
eld03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eld00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
i02_0161 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eld03019
]
i02_0161 (pcnB)
Enzymes [BR:
eld01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
i02_0161 (pcnB)
Messenger RNA biogenesis [BR:
eld03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
i02_0161 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AER82759
LinkDB
All DBs
Position
complement(164846..166264)
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AA seq
472 aa
AA seq
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MTLPRCTIFTRVANFCRKVLSREESEAEQAVARPQVTVIPREQHAISRKNISENALKVMY
RLNKAGYEAWLVGGGVRDLLLGKKPKDFDVTTNATPEQVRKLFRNCRLVGRRFRLAHVMF
GPEIIEVATFRGHHEGNVSDRTTSQRGQNGMLLRDNIFGSIEEDAQRRDFTINSLYYSVA
DFTVRDYVGGMKDLKDGVIRLIGNPETRYREDPVRMLRAVRFAAKLGMRISPETAEPIPR
LATLLNDIPPARLFEESLKLLQAGYGYETYKLLCEYHLFQPLFPTITRYFTENGDSPMER
IIEQVLKNTDTRIHNDMRVNPAFLFAAMFWYPLLETAQKIAQESGLTYHDAFALAMNDVL
DEACRSLAIPKRLTTLTRDIWQLQLRMSRRQGKRAWKLLEHPKFRAAYDLLALRAEVERN
AELQRLVKWWGEFQVSAPPDQKGMLNELDEEPSPRRRTRRPRKRAPRREGTA
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
ttgacactaccgaggtgtactatttttacccgagtcgctaatttttgccgcaaggtgcta
agccgcgaggaaagcgaggctgaacaggcagtcgcccgtccacaggtgacggtgatcccg
cgtgagcagcatgctatttcccgcaaaaatatcagtgaaaatgccctgaaggtaatgtac
aggctcaataaagcgggatacgaagcctggctggttggcggcggcgtgcgcgacctgtta
cttggcaaaaagccgaaagattttgacgtgaccaccaacgccacgccagagcaggtgcgc
aaactgttccgtaactgccgcctggtgggtcgccgtttccgtctggctcatgtgatgttt
ggcccggagattatcgaagttgcgaccttccgtggacatcacgaaggtaacgtcagcgac
cgcacgacctcccaacgcgggcaaaacggcatgttgctgcgcgacaacattttcggctcc
atcgaagaagacgcccagcgccgcgatttcactatcaacagcctgtattacagcgtggca
gattttaccgtccgtgattacgttggcggcatgaaggatctgaaagacggcgttatccgt
ctgattggtaacccggaaacgcgctaccgtgaagatccggtacgtatgctccgcgcggtt
cgttttgccgccaaattgggcatgcgcatcagcccggaaaccgcagaaccgatccctcgc
ctcgctaccctgctgaacgatatcccaccggcacgcctgtttgaagaatcgcttaaactg
ctacaagcgggctacggttacgaaacctataagctgctgtgtgaatatcatctgttccag
ccgctgttcccgaccattacccgctacttcacggaaaatggcgacagcccgatggaacgc
attattgagcaggtactgaagaataccgatacgcgtatccataacgatatgcgcgtgaac
ccggcgttcctgtttgccgccatgttctggtacccattgctggagacggcacagaagatc
gcccaggaaagcggcctgacctatcacgacgctttcgcactggcgatgaacgacgtgctg
gacgaagcctgccgctcactggcgatcccgaaacggctgaccacgctaacccgcgatatc
tggcagttgcagttgcgtatgtcccgtcgtcagggtaaacgcgcatggaaactgctggag
catcctaagttccgtgcggcatacgacctgttggccttacgagccgaagttgagcgtaac
gctgaactgcaacgtctggtgaaatggtggggtgagttccaggtttccgcgccaccagac
caaaaagggatgcttaacgaactggatgaagaaccgtcaccgcgtcgtcgtactcgtcgt
ccacgcaaacgcgcaccgcgtcgtgagggtaccgcatga
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