Escherichia coli clone D i2: i02_0204
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Entry
i02_0204 CDS
T02004
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
eld
Escherichia coli clone D i2
Pathway
eld03030
DNA replication
eld03430
Mismatch repair
eld03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eld00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
i02_0204 (dnaE)
03430 Mismatch repair
i02_0204 (dnaE)
03440 Homologous recombination
i02_0204 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eld03032
]
i02_0204 (dnaE)
03400 DNA repair and recombination proteins [BR:
eld03400
]
i02_0204 (dnaE)
Enzymes [BR:
eld01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
i02_0204 (dnaE)
DNA replication proteins [BR:
eld03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
i02_0204 (dnaE)
DNA repair and recombination proteins [BR:
eld03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
i02_0204 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AER82802
LinkDB
All DBs
Position
211016..214498
Genome browser
AA seq
1160 aa
AA seq
DB search
MSEPRFVHLRVHSDYSMIDGLAKTAPLVKKAAALGMPALAITDFTNLCGLVKFYGAGHGA
GIKPIVGADFNVQCDLLGDELTHLTVLAANNIGYQNLTLLISKAYQRGYGAAGPIIDRDW
LIELNEGLILLSGGRMGDVGRSLLRGNSALVDECVAFYEEHFPDRYFLELIRTGRPDEES
YLHAAVELAEARGLPVVATNDVRFIDSSDFDAHEIRVAIHDGFTLDDPKRPRNYSPQQYM
RSEEEMCELFADIPEALANTVEIAKRCNVTVRLGEYFLPQFPTGDMSTEDYLVKRAKEGL
EERLAFLFPDEEERLKRRPEYDERLDTELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPPDPGMTLAKAFEAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEEGKHPVTQ
FDKSDVEYAGLVKFDFLGLRTLTIINWALEMINKRRAKNGEPPLDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRSVFAEGAEKNGINAELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNKGGYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLGDALKAADQHAKAEAIGQADMFGVLAEEPEQIEQSYASCQPWPEQVVLDGERETLGLY
LTGHPINQYLKEIERYVGGVRLKDMHPTERGKVTTAAGLVVAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSD
RLLNDLRGLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaccacgtttcgtacacctgcgggtgcacagcgactactcgatgatcgatggc
ctggccaaaaccgcgccgctggtaaaaaaggcggcggcgttgggtatgccagcactggcg
atcaccgatttcaccaacctttgcggtctggtgaagttctacggagcgggacatggcgca
gggattaagcccatcgtcggggcagattttaatgtccagtgcgacctgctgggtgatgag
ttaacccacctgacggtgctggcggcgaacaatatcggctatcagaatctgacgttgctg
atctcaaaagcgtatcagcgcgggtacggtgccgccgggccgatcatcgatcgcgactgg
cttatcgaattaaacgaagggctgatcctcctttccggcgggcgcatgggcgacgtcggg
cgcagtcttttgcgtggtaacagcgcgctggtagatgagtgcgttgcgttttatgaagag
cacttcccggatcgctattttctcgagctgatccgaaccggcaggccggacgaagaaagt
tatctgcacgcggcagtggaactggcggaagcgcgcggtttgcccgtcgtggcgaccaat
gacgtgcgctttatcgacagcagcgactttgacgctcacgaaatccgcgtcgcgatccat
gacggctttactctcgacgatcccaaacgcccgcgtaattattcgccgcagcaatatatg
cgcagcgaagaggagatgtgcgagctgtttgccgacatccccgaagcccttgccaacact
gttgagatcgccaaacgctgtaacgtgactgtgcgtctgggtgaatacttcctgccgcag
ttcccgaccggggacatgagcaccgaagattatctggtcaagcgtgcaaaagaaggcctg
gaagagcgtctggcatttttattccctgacgaggaagaacgtcttaagcgtcgcccggag
tatgacgagcgtctggatactgaacttcaggttatcaaccagatgggcttcccgggttac
ttcctcatcgttatggaatttatccagtggtcgaaggataacggcgtaccggtagggcct
ggccgtggttccggtgcagggtcactggtggcctacgcgctgaaaattaccgacctcgat
ccgctggaatttgacctgctgttcgaacgtttccttaacccggaacgtgtctccatgcct
gacttcgacgttgacttctgtatggagaaacgtgaccaggttatcgaacacgtggcggac
atgtacggtcgcgatgcggtatcgcagatcatcaccttcggtacgatggcggcgaaagcg
gtgatccgcgacgtaggtcgtgtactggggcatccgtacggatttgtcgatcgtatctcg
aaactgatcccgcccgatccggggatgacgctggcgaaagcgtttgaagccgagccgcaa
ctgccggaaatctacgaagcggatgaagaagttaaggcgctgatcgacatggcgcgcaaa
ctggaaggggtcacccgtaacgccggtaagcacgccggtggggtggttatcgcgccgacc
aaaattaccgattttgcgccgctttattgcgatgaagagggcaaacatccggttacccag
tttgataaaagcgacgttgaatacgccgggctggtgaagttcgacttccttggtttgcgt
acgctcaccatcatcaactgggcgctggagatgatcaacaagcggcgggcgaagaatggc
gagccgccgctggatatcgccgcgatcccgctggatgacaagaaaagtttcgacatgctg
caacgctctgaaaccacggcggtattccagcttgaatcgcgcggcatgaaggatctgatc
aaacgtctgcaacctgactgcttcgaagatatgatcgcactggtggcgctattccgtccc
ggtccgttgcaatcagggatggtggataactttatcgaccgtaaacatggtcgcgaagag
atctcctatccggatgtgcagtggcagcatgaaagcctgaaaccggtactggagccaacc
tacggcattatcctgtatcaggaacaggtcatgcagattgcccaggtgctttctggttat
accctcggtggcgcggatatgctgcgtcgtgcgatgggtaagaaaaagccggaagagatg
gccaagcagcgttctgtatttgctgaaggcgcagaaaagaacgggatcaacgccgaactg
gcgatgaaaatcttcgacctggtggagaaattcgccggttacggatttaacaaatcgcac
tctgcggcctatgctttggtgtcatatcaaacgttatggctgaaagcgcactatccggcg
gagtttatggcggcagtaatgaccgccgatatggacaacaccgagaaggtggtgggcctg
gtggatgagtgctggcggatggggctgaaaatcctgccaccagatataaactccggtctt
taccatttccacgtcaacgacgacggcgaaatcgtgtatggtattggcgcgatcaaaggg
gtaggtgaaggtccgattgaggcgatcatcgaagcccgtaataaaggcggctatttccgt
gaactgtttgatctctgcgcccgtacagacaccaaaaagttaaaccggcgagtgctggaa
aaactgatcatgtccggggcgtttgaccgtcttgggccacaccgtgcggcgctgatgaac
tcgctgggcgatgcgttaaaggcggctgatcaacacgcgaaagcagaagccatcggtcag
gccgatatgttcggcgtgctggcagaagagccggaacaaattgaacaatcctacgccagt
tgccaaccgtggccggagcaggtggtgttagatggggaacgtgaaacgttaggtctgtac
ctgacgggacaccctatcaaccagtatttaaaagagattgagcgttatgtcggaggcgta
aggctgaaagacatgcacccgacagaacgtggtaaagtcaccacggctgcggggctcgtt
gttgctgcgcgggttatggtcaccaagcgcggcaatcgtatcggtatctgcacgctggat
gaccgttccgggcggctggaagtgatgttgtttactgacgccctggataaataccagcaa
ttgctggaaaaagaccgcatacttatcgtcagcggacaggtcagctttgatgacttcagc
ggtgggcttaaaatgaccgctcgcgaagtgatggatattgacgaagcccgggaaaaatat
gctcgcgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccga
ctccgtcagtctctggaaccccaccgctctgggacaattccagtacatctctactatcag
agggcggatgcacgcgcgcggttgcgttttggcgcgacgtggcgtgtctctccgagcgat
cgtttattaaacgatctccgtggcctcattggttcggagcaggtggaactggagtttgac
taa
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